CX295316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PATT5_SOLTU (Patatin-T5 OS=Solanum tuberosum PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 73/191 (38.22%), Postives = 114/191 (59.69%), Query Frame = 2 Query: 14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGAPKTEVK-YDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580 G F+L+DG VA ++P L++++ TK + + + +I +++Y + L++SLGTG K Y A + AKWG W+ + + +SS MTD+++STAF+AL S+N YLR+Q++ LTG +D A++ N++ LV +GE LLKK V+K N E T +EAL R AK LS K++R Sbjct: 206 GDKYEFNLVDGAVATVDDPALLSISVATK-LAQVDPKFASIKSLNYKQMLLLSLGTGTTSEFDKTYTAEETAKWGTARWM-----LVIQKMTSAASSYMTDYYLSTAFQALDSQNNYLRVQENALTGTTTELDDASEANMQLLVQVGEDLLKKSVSKDNPE----------TYEEALKRFAKLLSDRKKLR 380
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT13_SOLTU (Patatin-13 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.664e-25 Identity = 71/191 (37.17%), Postives = 113/191 (59.16%), Query Frame = 2 Query: 14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGA-PKTEVKYDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580 G F+L+DG VA +P L++++ T+ + + +I +++Y + L++SLGTG + + + A + AKWG L W+ + + +SS MTD+++ST F+ LHS+N YLR+Q++ LTG D A++ N+E LV +GE LLKKPV+K + E T +EAL R AK LS K++R Sbjct: 207 GDKYEFNLVDGAVATVADPALLSVSVATRRAEEDPA-FASIRSLNYKQLLLLSLGTGTNSEFDKTHTAQETAKWGALQWM-----LVIQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGETLLKKPVSKDSPE----------TYEEALKRFAKLLSDRKKLR 381
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT16_SOLTU (Patatin-16 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24 Identity = 71/191 (37.17%), Postives = 110/191 (57.59%), Query Frame = 2 Query: 14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGAPKTEVK-YDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580 G +L+DG VA +P L++++ T+ + + +I +++Y + L++SLGTG K + A + AKWG L W+ + + +SS MTD+++ST F+ LHS+N YLR+Q++ LTG D A++ N+E L +GE LLKKPV+K N E T +EAL R AK LS K++R Sbjct: 206 GDKYELNLVDGAVATVADPALLSVSVATRRAQEDPA-FASIRSLNYKKMLLLSLGTGTTSEFDKTHTAEETAKWGALQWM-----LVIQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENPLTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE----------TYEEALKRFAKLLSDRKKLR 380
BLAST of CX295316 vs. ExPASy Swiss-Prot
Match: PAT17_SOLCD (Patatin-17 OS=Solanum cardiophyllum PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.818e-24 Identity = 72/191 (37.70%), Postives = 114/191 (59.69%), Query Frame = 2 Query: 14 GKVRSFDLIDGGVAA-NNPTLVALNEVTKEINRGSSDYYAINAMDYTRFLVISLGTGAPKTEVK-YDAIKAAKWGVLGWLSSESSTPLVDVFMQSSSDMTDFHISTAFKALHSENGYLRIQDDTLTGDEASVDVATKKNLESLVGIGERLLKKPVTKVNFETGLCEPCGQGTNDEALIRLAKDLSKEKRIR 580 G F+L+DG VA +P L++++ T+ + + + +I +++Y + L++SLGTG K Y A +AA W + W+ + + +SS MTD+++STAF+AL S+N YLR+Q++ LTG +D A++ N+E LV +GE LLKKPV++ N E T +EAL R AK LS K++R Sbjct: 206 GDEYEFNLVDGAVATVADPALLSISVATRLAQKDPA-FASIRSLNYKKMLLLSLGTGTTSEFDKTYTAKEAATWTAVHWM-----LVIQKMTDAASSYMTDYYLSTAFQALDSKNNYLRVQENALTGTTTEMDDASEANMELLVQVGENLLKKPVSEDNPE----------TYEEALKRFAKLLSDRKKLR 380 The following BLAST results are available for this feature:
BLAST of CX295316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295316 ID=CX295316; Name=CX295316; organism=Citrus clementina; type=EST; length=720bpback to top |