CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.362e-38
Identity = 83/199 (41.71%), Postives = 125/199 (62.81%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KL+K+G+GTY+ VY+ R    + +VALK++R ++ E      + RE+ +L+ L H N++ L  +V +  S  L LVFEY++ DL       G   S   VK ++ Q+L GL +CH R VLHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG++ Y T +D+W  GCI  E+
Sbjct:  188 KMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDIVHTDKS--LTLVFEYLDKDLKQYMDDCGSIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEM 382          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSI (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. indica GN=CDKD-1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 92/204 (45.10%), Postives = 124/204 (60.78%), Query Frame = 3
Query:   63 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            V R AD + K + +G+GTY  V++A D      VA+KK+R    + E V F A REI +L+ L   N+I+L  +       +L+LVFE+ME DL  +     +  S A  K Y+Q +L GL  CH + VLHRD+K +NLLI  +G LK+ADFGLA  F  P++N   T +V   WYR PELL G   YG+AVD+W+ GCI AEL
Sbjct:   12 VKRVADRYLKREVLGEGTYGVVFKADDTKTGNTVAIKKIRLGKYK-EGVNFTALREIKLLKELKDSNIIEL--IDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPERN--FTHQVFARWYRAPELLFGTKQYGSAVDIWAAGCIFAEL 210          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 83/199 (41.71%), Postives = 125/199 (62.81%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KL+K+G+GTY+ VY+ R    + +VALK++R ++ E      + RE+ +L+ L H N++ L  +V +  S  L LVFEY++ DL       G   S   VK ++ Q+L GL +CH R VLHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG++ Y T +D+W  GCI  E+
Sbjct:  188 KMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDIVHTDKS--LTLVFEYLDKDLKQYMDDCGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEM 382          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.616e-38
Identity = 83/199 (41.71%), Postives = 125/199 (62.81%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KL+K+G+GTY+ VY+ R    + +VALK++R ++ E      + RE+ +L+ L H N++ L  +V +  S  L LVFEY++ DL       G   S   VK ++ Q+L GL +CH R VLHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG++ Y T +D+W  GCI  E+
Sbjct:  188 KMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDIVHTDKS--LTLVFEYLDKDLKQYMDDCGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINEKGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEM 382          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 85/200 (42.50%), Postives = 125/200 (62.50%), Query Frame = 3
Query:   75 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK--FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +  F++L+K+G+GTY+ VY+ R+    ++VALK++  D+ E  +     REI +++ L H N++ L  ++ +     L LVFEYM+ DL       G K      QVK +M QLL G+  CH   VLHRD+K  NLLI+  G LK+ADFGLA  +    N   ++ VVTLWYR P++LLG+  Y T++D+WS GCI+AE+
Sbjct:    4 SSQFQQLEKLGEGTYATVYKGRNRTTGQLVALKEINLDS-EEGTPSTAIREISLMKELKHENIVTLYDVIHTENK--LNLVFEYMDKDLKKFMDTNGNKGALETKQVKWFMYQLLRGILFCHDNRVLHRDLKPQNLLINAKGQLKLADFGLARAFGIPVN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSAGCIMAEM 199          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKD1_ORYSJ (Cyclin-dependent kinase D-1 OS=Oryza sativa subsp. japonica GN=CDKD-1 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.256e-37
Identity = 92/204 (45.10%), Postives = 124/204 (60.78%), Query Frame = 3
Query:   63 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLAS-FYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            V R AD + K + +G+GTY  V++A D      VA+KK+R    + E V F A REI +L+ L   N+I+L  +       +L+LVFE+ME DL  +     +  S A  K Y+Q +L GL  CH + VLHRD+K +NLLI  +G LK+ADFGLA  F  P++N   T +V   WYR PELL G   YG+AVD+W+ GCI AEL
Sbjct:   12 VKRVADRYLKREVLGEGTYGVVFKAVDTKTGNTVAIKKIRLGKYK-EGVNFTALREIKLLKELKDSNIIEL--IDAFPYKGNLHLVFEFMETDLEAVIRDRNIVLSPADTKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLIGADGQLKLADFGLARIFGSPERN--FTHQVFARWYRAPELLFGTKQYGSAVDIWAAGCIFAEL 210          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK20_PONAB (Cell division protein kinase 20 OS=Pongo abelii GN=CDK20 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.640e-37
Identity = 85/198 (42.93%), Postives = 120/198 (60.61%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D +  L +IG+G +  V++A+ ++  +IVALKKV    LE        REI  L+ + D+  V++L+ +     S    L FE+M  DLA +  H     ++AQVK Y+Q LL G+  CH+  ++HRD+K +NLLI  +G LKIADFGLA  + PD ++  T +V T WYR PELL GA  Y   VDLW+ GCI+ EL
Sbjct:    2 DQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEMEDNQYVVQLKAVFPH--SAGFVLAFEFMLSDLAEVVRHAQRPLAQAQVKSYLQMLLKGVSFCHANNIVHRDLKPANLLISASGQLKIADFGLARVFSPDGSRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGEL 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.142e-37
Identity = 82/199 (41.21%), Postives = 124/199 (62.31%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KLDK+G+GTY+ VY+ +      +VALK++R ++ E      + RE+ +L+ L H N++ L  ++ +  S  L LVFEY++ DL       G   +   VK ++ QLL GL +CH + VLHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG+T Y T +D+W  GCI  E+
Sbjct:  161 KLETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDIIHTEKS--LTLVFEYLDKDLKQYLDDCGNVINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR-AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 355          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: KP58_DROME (Serine/threonine-protein kinase PITSLRE OS=Drosophila melanogaster GN=Pitslre PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37
Identity = 84/202 (41.58%), Postives = 119/202 (58.91%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLAS---HPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAE 665
            R  + F+ L++I +GTY  VYRA+D    +IVALK+++ +  +        REI+ L +  H N++ +  +V       +++V +Y+EHDL  L     +    F   +VKC  QQLL  + H H   +LHRD+K SNLL+ + GILK+ DFGLA  Y     +  TS VVTLWYR PELLL +  Y T +D+WS GCI AE
Sbjct:  553 RSVEEFQCLNRIEEGTYGVVYRAKDKRTNEIVALKRLKMEKEKEGFPITSLREINTLLKGQHPNIVTVREIVVGSNMDKIFIVMDYVEHDLKSLMETMKNRKQSFFPGEVKCLTQQLLRAVAHLHDNWILHRDLKTSNLLLSHKGILKVGDFGLAREYG-SPIKKYTSLVVTLWYRAPELLLCSPVYSTPIDVWSVGCIFAE 753          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.798e-37
Identity = 86/196 (43.88%), Postives = 117/196 (59.69%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +E+ +KIG+GTY  VY+ARD      VALK++R D+ E        REI +L+ L H N++KL  +  S     L +VFEY++ DL             A ++ +M+ LL G+  CH R VLHRD+K  NLLI     LK+ DFGL  SF  P +    T+ VVTLWYRPP++LLG+  YG  VD+WS GCI +E+
Sbjct:    5 YERQEKIGEGTYGVVYKARDTSTAATVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHR--LTIVFEYLDLDLKKYLDRENGNLDAATIQHFMRDLLRGVAFCHQRSVLHRDLKPQNLLISREKELKLGDFGLGRSFAIPVRK--FTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEM 196          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK17_RAT7.362e-3841.71Cell division protein kinase 17 OS=Rattus norvegic... [more]
CDKD1_ORYSI9.616e-3845.10Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDK17_MOUSE9.616e-3841.71Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK17_HUMAN9.616e-3841.71Cell division protein kinase 17 OS=Homo sapiens GN... [more]
PHO85_YARLI1.256e-3742.50Negative regulator of the PHO system OS=Yarrowia l... [more]
CDKD1_ORYSJ1.256e-3745.10Cyclin-dependent kinase D-1 OS=Oryza sativa subsp.... [more]
CDK20_PONAB1.640e-3742.93Cell division protein kinase 20 OS=Pongo abelii GN... [more]
CDK16_MOUSE2.142e-3741.21Cell division protein kinase 16 OS=Mus musculus GN... [more]
KP58_DROME2.798e-3741.58Serine/threonine-protein kinase PITSLRE OS=Drosoph... [more]
CRK1_LEIME2.798e-3743.88Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]

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Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
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