CX295708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: Y1461_ARATH (Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1) HSP 1 Score: 344.739 bits (883), Expect = 2.490e-94 Identity = 163/208 (78.37%), Postives = 189/208 (90.87%), Query Frame = 3 Query: 45 EAIRGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 EA+ GWVPR+AD+FEK+DKIGQGTYSNVY+A+D+ KIVALKKVRFDNLEPESV+FMAREI +LRRLDH NV+KLEGLVTSRMSCSLYLVF+YM+HDLAGLAS P +KFSE++VKC M+QL+ GL+HCHSRGVLHRDIKGSNLLID+ G+LKIADFGLA+ +DP+ +P+TSRVVTLWYR PELLLGAT YG +DLWS GCILAEL Sbjct: 105 EALNGWVPRKADTFEKIDKIGQGTYSNVYKAKDMLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFQYMDHDLAGLASSPVVKFSESEVKCLMRQLISGLEHCHSRGVLHRDIKGSNLLIDDGGVLKIADFGLATIFDPNHKRPMTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCILAEL 312
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 2.685e-64 Identity = 126/219 (57.53%), Postives = 155/219 (70.78%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTS---------------RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D FEKL++IG+GTY VY AR+ + ++IVALKK+R DN E E A REI IL++L H NVI+L+ +VTS + S+Y+VFEYM+HDL GLA PG++F+ Q+KCYM+QLL GL +CH VLHRDIKGSNLLIDN G LK+ADFGLA + D N LT+RV+TLWYRPPELLLG+T YG AVD+WS GCI AEL Sbjct: 17 WGSRSVDCFEKLEQIGEGTYGQVYMARETETQEIVALKKIRMDN-EREGFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIHGNKYKGSIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMKQLLTGLHYCHINQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNGNLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAEL 234
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKC2_ORYSJ (Cyclin-dependent kinase C-2 OS=Oryza sativa subsp. japonica GN=CDKC-2 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 5.981e-64 Identity = 125/219 (57.08%), Postives = 154/219 (70.32%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTS---------------RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D FEKL++IG+GTY VY A++ + +IVALKK+R DN E E A REI IL++L H NVI+L+ +VTS + S+Y+VFEYM+HDL GLA PG++F+ Q+KCYM+QLL GL +CH VLHRDIKGSNLLIDN G LK+ADFGLA + D N LT+RV+TLWYRPPELLLG+T YG AVD+WS GCI AEL Sbjct: 17 WGSRSVDCFEKLEQIGEGTYGQVYMAKETETNEIVALKKIRMDN-EREGFPITAIREIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIEGNKYKGSIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSSDHNGNLTNRVITLWYRPPELLLGSTRYGPAVDMWSVGCIFAEL 234
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.740e-63 Identity = 125/218 (57.34%), Postives = 152/218 (69.72%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTS--------------RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D FEKL++IG+GTY VY A+++ +IVALKK+R DN E E A REI IL++L H NVI+L+ +VTS + +Y+VFEYM+HDL GLA PGL+F+ Q+KCYM+QLL GL +CH VLHRDIKGSNLLIDN G LK+ADFGLA Y D LT+RV+TLWYRPPELLLGAT YG A+D+WS GCI AEL Sbjct: 18 WGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDN-EREGFPITAIREIKILKKLHHENVIQLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAEL 234
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2) HSP 1 Score: 241.506 bits (615), Expect = 2.968e-63 Identity = 125/218 (57.34%), Postives = 151/218 (69.27%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTS--------------RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D FEKL++IG+GTY VY A+++ +IVALKK+R DN E E A REI IL++L H NVI L+ +VTS + +Y+VFEYM+HDL GLA PGL+F+ Q+KCYM+QLL GL +CH VLHRDIKGSNLLIDN G LK+ADFGLA Y D LT+RV+TLWYRPPELLLGAT YG A+D+WS GCI AEL Sbjct: 18 WGSRSVDCFEKLEQIGEGTYGQVYMAKEIKTGEIVALKKIRMDN-EREGFPITAIREIKILKKLHHENVIHLKEIVTSPGRDRDDQGKPDNNKYKGGIYMVFEYMDHDLTGLADRPGLRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSYSHDHTGNLTNRVITLWYRPPELLLGATKYGPAIDMWSVGCIFAEL 234
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK12_RAT (Cell division protein kinase 12 OS=Rattus norvegicus GN=Cdk12 PE=1 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.250e-53 Identity = 106/212 (50.00%), Postives = 145/212 (68.40%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSC--------SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D F+ + IG+GTY VY+A+D D ++VALKKVR DN E E A REI ILR+L H +V+ ++ +VT + + YLVFEYM+HDL GL + FSE +K +M+QL+ GLD+CH + LHRDIK SN+L++N+G +K+ADFGLA Y+ ++++P T++V+TLWYRPPELLLG Y A+D+WS GCIL EL Sbjct: 715 WGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDN-EKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGEL 925
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK12_MOUSE (Cell division protein kinase 12 OS=Mus musculus GN=Cdk12 PE=1 SV=2) HSP 1 Score: 209.534 bits (532), Expect = 1.250e-53 Identity = 106/212 (50.00%), Postives = 145/212 (68.40%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSC--------SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D F+ + IG+GTY VY+A+D D ++VALKKVR DN E E A REI ILR+L H +V+ ++ +VT + + YLVFEYM+HDL GL + FSE +K +M+QL+ GLD+CH + LHRDIK SN+L++N+G +K+ADFGLA Y+ ++++P T++V+TLWYRPPELLLG Y A+D+WS GCIL EL Sbjct: 715 WGKRCVDKFDIIGIIGEGTYGQVYKAKDKDTGELVALKKVRLDN-EKEGFPITAIREIKILRQLVHQSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLDYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGEL 925
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK12_HUMAN (Cell division protein kinase 12 OS=Homo sapiens GN=CDK12 PE=1 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.633e-53 Identity = 106/212 (50.00%), Postives = 145/212 (68.40%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSC--------SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D F+ + IG+GTY VY+ARD D ++VALKKVR DN E E A REI ILR+L H +V+ ++ +VT + + YLVFEYM+HDL GL + FSE +K +M+QL+ GL++CH + LHRDIK SN+L++N+G +K+ADFGLA Y+ ++++P T++V+TLWYRPPELLLG Y A+D+WS GCIL EL Sbjct: 719 WGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGELVALKKVRLDN-EKEGFPITAIREIKILRQLIHRSVVNMKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLMEGLEYCHKKNFLHRDIKCSNILLNNSGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGEL 929
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK13_MOUSE (Cell division protein kinase 13 OS=Mus musculus GN=Cdk13 PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.785e-53 Identity = 106/212 (50.00%), Postives = 143/212 (67.45%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSC--------SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D F+ + IG+GTY VY+ARD D ++VALKKVR DN E E A REI ILR+L H ++I ++ +VT + + YLVFEYM+HDL GL + F+E +K +M+QL+ GLD+CH + LHRDIK SN+L++N G +K+ADFGLA Y ++++P T++V+TLWYRPPELLLG Y A+D+WS GCIL EL Sbjct: 697 WGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDN-EKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGEL 907
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.785e-53 Identity = 106/212 (50.00%), Postives = 143/212 (67.45%), Query Frame = 3 Query: 60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSC--------SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668 W R D F+ + IG+GTY VY+ARD D ++VALKKVR DN E E A REI ILR+L H ++I ++ +VT + + YLVFEYM+HDL GL + F+E +K +M+QL+ GLD+CH + LHRDIK SN+L++N G +K+ADFGLA Y ++++P T++V+TLWYRPPELLLG Y A+D+WS GCIL EL Sbjct: 697 WGKRCVDKFDIIGIIGEGTYGQVYKARDKDTGEMVALKKVRLDN-EKEGFPITAIREIKILRQLTHQSIINMKEIVTDKEDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFNENHIKSFMRQLMEGLDYCHKKNFLHRDIKCSNILLNNRGQIKLADFGLARLYSSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSCGCILGEL 907 The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bpback to top |