CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CTK1_YEAST (CTD kinase subunit alpha OS=Saccharomyces cerevisiae GN=CTK1 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.532e-43
Identity = 87/200 (43.50%), Postives = 129/200 (64.50%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R    + ++ ++G+GTY  VY+A++ + +K+VALKK+R             REI +L+  DH NV  ++ ++      ++Y++FEY ++DL+GL  +  ++ S +Q K   +QLL G+++ H   +LHRD+KGSN+LIDN G LKI DFGLA     +     T+RV+TLWYRPPELLLG T YGT VD+W  GC+L EL
Sbjct:  178 RSTSVYLRIMQVGEGTYGKVYKAKNTNTEKLVALKKLRLQGEREGFPITSIREIKLLQSFDHPNVSTIKEIMVESQK-TVYMIFEYADNDLSGLLLNKEVQISHSQCKHLFKQLLLGMEYLHDNKILHRDVKGSNILIDNQGNLKITDFGLAR--KMNSRADYTNRVITLWYRPPELLLGTTNYGTEVDMWGCGCLLVEL 374          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK9B_XENLA (Cell division protein kinase 9-B OS=Xenopus laevis GN=cdk9-B PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.532e-43
Identity = 101/209 (48.33%), Postives = 138/209 (66.03%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMS--------C--SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-QP--LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +E+L KIGQGT+  V++A+     K VALKKV  +N E E     A REI IL+ L H NV+ L  +  +++S        C  +++LVF++ EHDLAGL S+  +KF+ A++K  MQ LL GL + H   +LHRD+K +N+LI  +G+LK+ADFGLA  +   +N QP   T+RVVTLWYRPPELLLG   YG  +DLW  GCI+AE+
Sbjct:   19 YERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVHLIEICRNKISPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVKFTVAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 226          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK9_SCHPO (Serine/threonine-protein kinase cdk9 OS=Schizosaccharomyces pombe GN=cdk9 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.613e-43
Identity = 93/214 (43.46%), Postives = 130/214 (60.75%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSC------SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASF------------YDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +  ++K+G+GT+  VY+++     K+ ALK++   + E E     A REI IL+ + H N+I L  +   R         S+Y+V  YM+HDL+GL  +P +KF+E Q+KCYM+QL  G  + H + +LHRD+K +NLLIDN+GILKIADFGLA                P   +  T  VVT WYR PELLLG   Y TA+D+WS GCI+AE+
Sbjct:   36 YHLMEKLGEGTFGEVYKSQRRKDGKVYALKRILM-HTEKEGFPITAIREIKILKSIKHENIIPLSDMTVVRADKKHRRRGSIYMVTPYMDHDLSGLLENPSVKFTEPQIKCYMKQLFAGTKYLHDQLILHRDLKAANLLIDNHGILKIADFGLARVITEESYANKNPGLPPPNRREYTGCVVTRWYRSPELLLGERRYTTAIDMWSVGCIMAEM 248          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK12_CAEEL (Putative cell division protein kinase 12 OS=Caenorhabditis elegans GN=cdtl-7 PE=3 SV=4)

HSP 1 Score: 175.252 bits (443), Expect = 2.613e-43
Identity = 100/213 (46.95%), Postives = 136/213 (63.85%), Query Frame = 3
Query:   60 WVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMS--------CSLYLVFEYMEHDLAGLASHPGL-KFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            W       +  LD+IG+GTY  VY+A +    + VALK+VR +N E E     A REI ILR+L H N+++L  +V   +S         + YLVFEY++HDL GL     L  F++ Q+    +QLL GL + H+ G LHRDIK SN+L++N G LKIAD GLA  ++ + ++  T+RV+TLWYRPPELLLG   YG A+D+WSTGC+L EL
Sbjct:  303 WYKTNLTHYTMLDQIGEGTYGQVYKAVNNLTGEQVALKRVRLEN-EKEGFPITAIREIKILRQLHHKNIVRLMDIVIDDISMDELKRTRANFYLVFEYVDHDLIGLLESKELVDFNKDQICSLFKQLLEGLAYIHNTGFLHRDIKCSNILVNNKGELKIADLGLARLWEKE-SRLYTNRVITLWYRPPELLLGDERYGPAIDVWSTGCMLGEL 513          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK9_XENTR (Cell division protein kinase 9 OS=Xenopus tropicalis GN=cdk9 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.412e-43
Identity = 100/209 (47.85%), Postives = 138/209 (66.03%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMS--------C--SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-QP--LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +E+L KIGQGT+  V++A+     K VALKKV  +N E E     A REI IL+ L H NV+ L  +  +++S        C  +++LVF++ EHDLAGL S+  +KF+ +++K  MQ LL GL + H   +LHRD+K +N+LI  +G+LK+ADFGLA  +   +N QP   T+RVVTLWYRPPELLLG   YG  +DLW  GCI+AE+
Sbjct:   19 YERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKISPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 226          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK9A_XENLA (Cell division protein kinase 9-A OS=Xenopus laevis GN=cdk9-A PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.412e-43
Identity = 100/209 (47.85%), Postives = 138/209 (66.03%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMS--------C--SLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN-QP--LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +E+L KIGQGT+  V++A+     K VALKKV  +N E E     A REI IL+ L H NV+ L  +  +++S        C  +++LVF++ EHDLAGL S+  +KF+ +++K  MQ LL GL + H   +LHRD+K +N+LI  +G+LK+ADFGLA  +   +N QP   T+RVVTLWYRPPELLLG   YG  +DLW  GCI+AE+
Sbjct:   19 YERLAKIGQGTFGEVFKAKHRQTGKKVALKKVLMEN-EKEGFPITALREIKILQLLKHENVVNLIEICRTKVSPTANQYNRCKGTIFLVFDFCEHDLAGLLSNAHVKFTLSEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNKYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM 226          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 4.456e-43
Identity = 97/199 (48.74%), Postives = 132/199 (66.33%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++F+K++KIG+GTY  VY+AR+ +  +IVALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE++  DL        +   S A VK Y+ QLL GL  CHS  VLHRD+K  NLLI+++G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  +Y TAVD+WS GCI AE+
Sbjct:    2 ENFQKVEKIGEGTYGVVYKARNRETGEIVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLNQDLKKFMDGSNISGISLALVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINSDGAIKLADFGLARAFGVPV-RTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: BUR1_YARLI (Serine/threonine-protein kinase BUR1 OS=Yarrowia lipolytica GN=BUR1 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.820e-43
Identity = 95/211 (45.02%), Postives = 130/211 (61.61%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCS------LYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD-PDQN--------QPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAE 665
            +S++ L KIG+GT+  V+RA  +  K+ VALKK+   + +        REI IL+ L H NVI L  L   R   S      +Y+V  YM+HDLAGL  +  ++ S A +KCYM QLL G+ + H++  LHRDIK +N+L+++ GILK+ADFGLA  YD P  N        + LT+ VVT WYRPPEL+LG   Y TA+D+W  GC+  E
Sbjct:   36 ESYKPLGKIGEGTFGEVFRAEQITTKRHVALKKILLHSEKEGFPVTALREIRILKLLRHENVIPLVDLAVERGDQSKKERGCVYMVTPYMDHDLAGLLGNQSVQLSPAHIKCYMLQLLEGIGYLHAKKFLHRDIKAANILVNDQGILKLADFGLARGYDGPAPNSQTAGVNTENLTAMVVTRWYRPPELILGDRKYTTAIDMWGIGCVFGE 246          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.693e-42
Identity = 93/200 (46.50%), Postives = 133/200 (66.50%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +EK++KIG+GTY  VY+ARD    + +ALKK+R +  E E V   A REI +L+ + H N+++L+ +V S     LYLVFEY++ DL   + S P     + Q+K ++ Q+LCG+ +CHS  VLHRD+K  NLLID ++  +K+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y T VD+WS GCI AE+
Sbjct:    2 EQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEK--RLYLVFEYLDLDLKKFMDSSPEFAKDQRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNAVKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK9_CAEEL (Probable cell division protein kinase 9 OS=Caenorhabditis elegans GN=cdk-9 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.212e-42
Identity = 96/214 (44.86%), Postives = 134/214 (62.62%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKL--------EGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQN----QPL-TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R   ++EKL+KIGQGT+  V++AR  +  ++VALKK+  +N E E     A RE+ +L +L H N+  L         G   S+   + YLV     HDLAGL S+P ++ S   +K  M+ L+ GL+  H   +LHRD+K +N+LI  +GILK+ADFGLA  +   +N    +PL T+RVVTLWYRPPELLLG   YGT +D+W  GCI+AE+
Sbjct:   80 RDVSTYEKLNKIGQGTFGEVFKARCKNTGRMVALKKILMEN-EKEGFPITALREVKMLEQLKHPNITDLIEVCSAKSTGTTGSKDRATFYLVMALCAHDLAGLLSNPKIRMSLVHIKTMMKHLMSGLNKLHRSKILHRDMKAANVLISKDGILKLADFGLARPFVQRENGAGPRPLYTNRVVTLWYRPPELLLGDRQYGTKIDVWGAGCIMAEM 292          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CTK1_YEAST1.532e-4343.50CTD kinase subunit alpha OS=Saccharomyces cerevisi... [more]
CDK9B_XENLA1.532e-4348.33Cell division protein kinase 9-B OS=Xenopus laevis... [more]
CDK9_SCHPO2.613e-4343.46Serine/threonine-protein kinase cdk9 OS=Schizosacc... [more]
CDK12_CAEEL2.613e-4346.95Putative cell division protein kinase 12 OS=Caenor... [more]
CDK9_XENTR3.412e-4347.85Cell division protein kinase 9 OS=Xenopus tropical... [more]
CDK9A_XENLA3.412e-4347.85Cell division protein kinase 9-A OS=Xenopus laevis... [more]
CDK2_XENLA4.456e-4348.74Cell division protein kinase 2 OS=Xenopus laevis G... [more]
BUR1_YARLI5.820e-4345.02Serine/threonine-protein kinase BUR1 OS=Yarrowia l... [more]
CDC22_MEDSA1.693e-4246.50Cell division control protein 2 homolog 2 OS=Medic... [more]
CDK9_CAEEL2.212e-4244.86Probable cell division protein kinase 9 OS=Caenorh... [more]

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Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
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