CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10916 contig Ccv1_Contig10916:752..1419. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.927e-42
Identity = 95/199 (47.74%), Postives = 132/199 (66.33%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D F+K++KIG+GTY  VY+A++ +  ++VALKK+R D LE E V   A REI +L+ L H N+++L  +V +     LYLVFE++  DL   + S PG +     +K Y+ QLL G+  CHS  V+HRD+K  NLLI+  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y TAVD+WS GCI AE+
Sbjct:    2 DMFQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLD-LEMEGVPSTAIREISLLKELKHPNIVRLLDVVHNERK--LYLVFEFLSQDLKKYMDSTPGSELPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLINELGAIKLADFGLARAFGVPL-RTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.927e-42
Identity = 95/200 (47.50%), Postives = 130/200 (65.00%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDL-AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +EK++KIG+GTY  VY+ARD    + +ALKK+R +  E E V   A REI +L+ + H N+++L+ +V S     LYLVFEY++ DL   + S P       QVK ++ Q+LCG+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y T VD+WS GCI AE+
Sbjct:    2 EQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEK--RLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: BUR1_GIBZE (Serine/threonine-protein kinase BUR1 OS=Gibberella zeae GN=BUR1 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.927e-42
Identity = 92/217 (42.40%), Postives = 127/217 (58.53%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTS--------RMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYD---PDQNQPL-------TSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R   +E L K+G+GT+  V+RAR      +VALKK+   + +        REI +L+ L H N+++LE +           R    +Y+   YM+HDL+GL  +P ++F E Q+KCYM QLL GL + H   +LHRD+K +NLLI+N GIL+IADFGLA  YD   P+   P+       T  VVT WYRPPELLL    Y  A+D+W  GC+  E+
Sbjct:   33 RISDYELLGKLGEGTFGEVHRARLRKTGALVALKKIIMHHEKDGFPITALREIKLLKLLSHKNILRLEDMAIEHPTRQTDKRKKPIVYMATPYMDHDLSGLLDNPSVQFKEPQIKCYMLQLLEGLRYLHDSRILHRDMKAANLLINNKGILQIADFGLARHYDGRTPESGVPMGEGKRDYTGLVVTRWYRPPELLLQLRQYTPAIDVWGVGCVFGEM 249          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_VIGUN (Cell division control protein 2 homolog OS=Vigna unguiculata GN=CDC2 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.098e-41
Identity = 94/200 (47.00%), Postives = 130/200 (65.00%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDL-AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +EK++KIG+GTY  VY+ARD    + +ALKK+R +  E E V   A REI +L+ + H N+++L+ +V S     LYLVFEY++ DL   + S P       QVK ++ Q+LCG+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y T VD+WS GC+ AE+
Sbjct:    2 EQYEKVEKIGEGTYGVVYKARDRVTDETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEK--RLYLVFEYLDLDLKKHMDSSPEFVKDPRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCLFAEM 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.194e-41
Identity = 95/200 (47.50%), Postives = 128/200 (64.00%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDL-AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D +EK++KIG+GTY  VY+ARD    + +ALKK+R +  E E V   A REI +L+ + H N++KL+ +V S     LYLVFEY++ DL   + S P        +K Y+ Q+L G+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y T VD+WS GCI AE+
Sbjct:    2 DQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHSNIVKLQDVVHSEK--RLYLVFEYLDLDLKKHMDSTPDFSKDLHMIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSVGCIFAEM 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK7_MOUSE (Cell division protein kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.194e-41
Identity = 93/206 (45.15%), Postives = 128/206 (62.14%), Query Frame = 3
Query:   63 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV---RFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            V  RA  +EKLD +G+G ++ VY+ARD +  +IVA+KK++  +         R   REI +L+ L H N+I L      + + SL  VF++ME DL  +     L  + + +K YM   L GL++ H   +LHRD+K +NLL+D NG+LK+ADFGLA SF  P  N+  T +VVT WYR PELL GA  YG  VD+W+ GCILAEL
Sbjct:    5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL--VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK7_HUMAN (Cell division protein kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.194e-41
Identity = 93/206 (45.15%), Postives = 128/206 (62.14%), Query Frame = 3
Query:   63 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV---RFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            V  RA  +EKLD +G+G ++ VY+ARD +  +IVA+KK++  +         R   REI +L+ L H N+I L      + + SL  VF++ME DL  +     L  + + +K YM   L GL++ H   +LHRD+K +NLL+D NG+LK+ADFGLA SF  P  N+  T +VVT WYR PELL GA  YG  VD+W+ GCILAEL
Sbjct:    5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL--VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 206          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.194e-41
Identity = 95/199 (47.74%), Postives = 127/199 (63.82%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++F+K++KIG+GTY  VY+AR+    ++VALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE++  DL        L       +K Y+ QLL GL  CHS  VLHRD+K  NLLI+  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  YY TAVD+WS GCI AE+
Sbjct:    2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.171e-41
Identity = 91/195 (46.67%), Postives = 124/195 (63.59%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +EKL+KIG+GTY  V++A++ D  +IVALK+VR D+ +        REI +L+ L H N+++L  ++ S     L LVFE+ + DL               VK +M QLL GL  CHSR VLHRD+K  NLLI+ NG LK+ADFGLA  +     +  ++ VVTLWYRPP++L GA  Y T++D+WS GCI AEL
Sbjct:    4 YEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.171e-41
Identity = 97/199 (48.74%), Postives = 128/199 (64.32%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +SF+K++KIG+GTY  VY+A++    + VALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE++  DL   + S      S   VK Y+ QLL GL  CHS  VLHRD+K  NLLI+  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  YY TAVD+WS GCI AE+
Sbjct:    2 ESFQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLHDVIHTENK--LYLVFEFLHQDLKRFMDSSTVTGISLPLVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAQGEIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK3_HUMAN4.927e-4247.74Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDC2_VIGAC4.927e-4247.50Cell division control protein 2 homolog OS=Vigna a... [more]
BUR1_GIBZE4.927e-4242.40Serine/threonine-protein kinase BUR1 OS=Gibberella... [more]
CDC2_VIGUN1.098e-4147.00Cell division control protein 2 homolog OS=Vigna u... [more]
CDKA1_ARATH3.194e-4147.50Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDK7_MOUSE3.194e-4145.15Cell division protein kinase 7 OS=Mus musculus GN=... [more]
CDK7_HUMAN3.194e-4145.15Cell division protein kinase 7 OS=Homo sapiens GN=... [more]
CDK2_HUMAN3.194e-4147.74Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDK5_XENLA4.171e-4146.67Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDK2_CARAU4.171e-4148.74Cell division protein kinase 2 OS=Carassius auratu... [more]

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Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
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