CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CIPK8_ORYSJ (CBL-interacting protein kinase 8 OS=Oryza sativa subsp. japonica GN=CIPK8 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23
Identity = 75/205 (36.59%), Postives = 110/205 (53.66%), Query Frame = 3
Query:   51 IRGWVPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAVDLWSTGCIL 659
            + G   RR   +E    IG+GT++ V  A++ +  + VA+K V R   L+ +    + REI I++ + H NV++L  ++ SR    + L F         +  H  L  +EA  + Y QQL+ G+D CHS+GV HRD+K  NLL+D+ G LKI+DFGL+++  P Q   L      T  Y  PE+L    Y G   D WS G IL
Sbjct:    2 VGGGALRRVGKYEVGRTIGEGTFAKVKFAQNTESGESVAMKVVDRSSILKHKMADQIKREISIMKLVRHPNVVRLHEVLASRKKIFIILEFITGGELFDKIIRHGRL--NEADARRYFQQLIDGVDFCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSAW--PAQGGALLRTTCGTPNYVAPEVLSHKGYDGALADTWSCGVIL 202          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CIPK8_ARATH (CBL-interacting serine/threonine-protein kinase 8 OS=Arabidopsis thaliana GN=CIPK8 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.761e-23
Identity = 73/202 (36.14%), Postives = 117/202 (57.92%), Query Frame = 3
Query:   63 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKV-RFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQP-LTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCIL 659
            V R+   +E    IG+GT++ V  A++ +  + VA+K V R   ++ + V  + REI I++ + H  V++L  ++ SR    +Y++ EY+   +L       G + SE++ + Y  QL+ G+D+CHS+GV HRD+K  NLL+D+ G LKI+DFGL++   P+Q    L +   T  Y  PE+L    Y G   D+WS G IL
Sbjct:    2 VVRKVGKYELGRTIGEGTFAKVKFAQNTETGESVAMKIVDRSTIIKRKMVDQIKREISIMKLVRHPCVVRLYEVLASRTK--IYIILEYITGGELFDKIVRNG-RLSESEARKYFHQLIDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSAL--PEQGVTILKTTCGTPNYVAPEVLSHKGYNGAVADIWSCGVIL 198          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: NLK_CAEBR (Serine/threonine kinase NLK OS=Caenorhabditis briggsae GN=lit-1 PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 59/130 (45.38%), Postives = 79/130 (60.77%), Query Frame = 3
Query:  279 LVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            L+  R     Y++ E M+ DL  +   P     +  VK ++ Q+L GL + H+  +LHRDIK  NLL+++N ILKI DFGLA  +D      +T  VVT +YR PELL+GA  Y  AVD+WS GCI AEL
Sbjct:  333 LLEGRKETITYVLTELMQSDLHKIIVSPQTLTID-HVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDSRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAEL 461          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: MARK4_MOUSE (MAP/microtubule affinity-regulating kinase 4 OS=Mus musculus GN=Mark4 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 3
Query:   81 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-----LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW----YRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++  L  IG+G ++ V  AR +   + VA+K +    L P S++ + RE+ I++ L+H N++KL  ++ +  +  LYLV EY     AG     L SH  +K  EA+ K   +Q++  + +CH + ++HRD+K  NLL+D    +KIADFG ++ +       L S++ T      Y  PEL  G  Y G  VD+WS G IL  L
Sbjct:   58 NYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKT--LYLVMEYAS---AGEVFDYLVSHGRMKEKEARAK--FRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFSNEF------TLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTL 249          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: MARK4_HUMAN (MAP/microtubule affinity-regulating kinase 4 OS=Homo sapiens GN=MARK4 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 71/205 (34.63%), Postives = 112/205 (54.63%), Query Frame = 3
Query:   81 SFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-----LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLW----YRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++  L  IG+G ++ V  AR +   + VA+K +    L P S++ + RE+ I++ L+H N++KL  ++ +  +  LYLV EY     AG     L SH  +K  EA+ K   +Q++  + +CH + ++HRD+K  NLL+D    +KIADFG ++ +       L S++ T      Y  PEL  G  Y G  VD+WS G IL  L
Sbjct:   58 NYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFREVRIMKGLNHPNIVKLFEVIETEKT--LYLVMEYAS---AGEVFDYLVSHGRMKEKEARAK--FRQIVSAVHYCHQKNIVHRDLKAENLLLDAEANIKIADFGFSNEF------TLGSKLDTFCGSPPYAAPELFQGKKYDGPEVDIWSLGVILYTL 249          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 72/209 (34.45%), Postives = 112/209 (53.59%), Query Frame = 3
Query:   66 PRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGL---VTSRMSCSLYLVFEYMEHDLAGLASH---PGLKFSEAQVKCYMQQLLCGLDHCHSR-GVLHRDIKGSNLLIDN-NGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            P++  S+     +G G++  V++A+ L+  + VA+KKV  D       R+  RE+ ++R +DH NV+ L+      T+R    L LV EY+   L  +  H      +     VK Y  Q+  GL + H+  GV HRD+K  NLL+D      K+ DFG A      + +   S + + +YR PEL+ GAT Y +++D+WS GC+LAEL
Sbjct:   66 PKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDR------RYKNRELQLMRLMDHPNVVSLKHCFFSTTTRDELFLNLVMEYVPETLYRVLKHYTSSNQRMPIFYVKLYTYQIFRGLAYIHTAPGVCHRDVKPQNLLVDPLTHQCKLCDFGSAKVLV--KGEANISYICSRYYRAPELIFGATEYTSSIDIWSAGCVLAEL 266          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 72/203 (35.47%), Postives = 113/203 (55.67%), Query Frame = 3
Query:   63 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDN-LEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHD--LAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAVDLWSTGCIL 659
            V RR   +E    IG+GT++ V  ARD +    VA+K +  +  L+ + V  + REI  ++ + H NV+++  ++ S+    +Y+V EY+        + +H  ++  EA  + Y QQL+  +D+CHSRGV HRD+K  NLL+D+ G LK++DFGL++     ++  L      T  Y  PE+L    Y G   DLWS G IL
Sbjct:    6 VKRRVGKYELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTK--IYIVLEYVTGGELFDTIVNHGRMREDEA--RRYFQQLINAVDYCHSRGVYHRDLKPENLLLDSYGNLKVSDFGLSALSQQIKDDGLLHTTCGTPNYVAPEVLEDQGYDGAMADLWSCGVIL 204          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CIPKP_ARATH (CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana GN=CIPK25 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 65/188 (34.57%), Postives = 108/188 (57.45%), Query Frame = 3
Query:  102 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV-RFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPD-QNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCIL 659
            +G+GT+  VY  +++   + VA+K +  D ++ E +   + REI I+R + H N+++L+ ++ ++    ++ + EY++          G K  E   + Y QQL+  +D CHSRGV HRD+K  NLL+D NG LK++DFGL++  +   Q+  L ++  T  Y  PE+L    Y G   D+WS G IL
Sbjct:   49 LGKGTFGKVYYGKEITTGESVAIKIINKDQVKREGMMEQIKREISIMRLVRHPNIVELKEVMATKTK--IFFIMEYVKGGELFSKIVKG-KLKEDSARKYFQQLISAVDFCHSRGVSHRDLKPENLLVDENGDLKVSDFGLSALPEQILQDGLLHTQCGTPAYVAPEVLRKKGYDGAKGDIWSCGIIL 233          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 69/189 (36.51%), Postives = 106/189 (56.08%), Query Frame = 3
Query:  102 IGQGTYSNVYRARDLDQKKIVALKKVRFDN-LEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVV-TLWYRPPELLLGATYYGTAVDLWSTGCIL 659
            +G GT++ VY AR++   + VA+K +  +  L+   +  + REI ILRR+ H N+++L  ++ ++    +Y V EY+   +L    +   LK  E   + Y QQL+  +  CH+RGV HRD+K  NLL+D NG LK++DFGL++  D  +   L      T  Y  PE+L    Y    VD+WS G IL
Sbjct:   32 LGHGTFAKVYLARNVKTNESVAIKVIDKEKVLKGGLIAHIKREISILRRVRHPNIVQLFEVMATK--AKIYFVMEYVRGGELFNKVAKGRLK--EEVARKYFQQLISAVTFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKVDIWSCGVIL 216          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC15_YEAST (Cell division control protein 15 OS=Saccharomyces cerevisiae GN=CDC15 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 66/190 (34.74%), Postives = 106/190 (55.79%), Query Frame = 3
Query:  102 IGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEH-DLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            IG+G+Y  VY+A +    ++VA+K+V ++N   E +  +  EI +L+ L+H N++K  G +  R S  LY++ EY  +  L  L S      SE + K Y+ Q L GL + H  GV+HRDIK +N+L+  +  +K+ADFG+++      N    +   TL +  PE +LG     T  D+WS G  + E+
Sbjct:   31 IGRGSYGVVYKAINKHTDQVVAIKEVVYEN--DEELNDIMAEISLLKNLNHNNIVKYHGFI--RKSYELYILLEYCANGSLRRLISRSSTGLSENESKTYVTQTLLGLKYLHGEGVIHRDIKAANILLSADNTVKLADFGVSTIV----NSSALTLAGTLNWMAPE-ILGNRGASTLSDIWSLGATVVEM 211          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPK8_ORYSJ1.761e-2336.59CBL-interacting protein kinase 8 OS=Oryza sativa s... [more]
CIPK8_ARATH1.761e-2336.14CBL-interacting serine/threonine-protein kinase 8 ... [more]
NLK_CAEBR2.299e-2345.38Serine/threonine kinase NLK OS=Caenorhabditis brig... [more]
MARK4_MOUSE2.299e-2334.63MAP/microtubule affinity-regulating kinase 4 OS=Mu... [more]
MARK4_HUMAN2.299e-2334.63MAP/microtubule affinity-regulating kinase 4 OS=Ho... [more]
KSG6_ARATH2.299e-2334.45Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
CIPKW_ORYSJ2.299e-2335.47CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]
CIPKP_ARATH2.299e-2334.57CBL-interacting serine/threonine-protein kinase 25... [more]
CIPKC_ARATH2.299e-2336.51CBL-interacting serine/threonine-protein kinase 12... [more]
CDC15_YEAST2.299e-2334.74Cell division control protein 15 OS=Saccharomyces ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
back to top