CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK7_XENLA (Cell division protein kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.447e-41
Identity = 94/206 (45.63%), Postives = 129/206 (62.62%), Query Frame = 3
Query:   63 VPRRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV---RFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            V  RA  +EKLD +G+G ++ VY+ARD +  +IVA+KK++  +    +    R   REI +L+ L H N+I L      + + SL  VF++ME DL  +     L  + A +K YM   L GL++ H   +LHRD+K +NLL+D NG+LK+ADFGLA SF  P  N+  T +VVT WYR PELL GA  YG  VD+W+ GCILAEL
Sbjct:   11 VRSRAKQYEKLDFLGEGQFATVYKARDKNTDRIVAIKKIKLGHRAEANDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL--VFDFMETDLEVIIKDTSLVLTPAHIKSYMLMTLQGLEYLHHLWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NRIYTHQVVTRWYRSPELLFGARMYGVGVDMWAVGCILAEL 212          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_BOVIN (Cell division protein kinase 2 OS=Bos taurus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.214e-40
Identity = 94/199 (47.24%), Postives = 128/199 (64.32%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++F+K++KIG+GTY  VY+A++    ++VALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE++  DL        L       +K Y+ QLL GL  CHS  VLHRD+K  NLLI+ +G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  YY TAVD+WS GCI AE+
Sbjct:    2 ENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINADGSIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.585e-40
Identity = 94/199 (47.24%), Postives = 127/199 (63.82%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++F+K++KIG+GTY  VY+A++    ++VALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE++  DL        L       +K Y+ QLL GL  CHS  VLHRD+K  NLLI+  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  YY TAVD+WS GCI AE+
Sbjct:    2 ENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFMDASALTGLPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.585e-40
Identity = 94/199 (47.24%), Postives = 127/199 (63.82%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLK-FSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++F+K++KIG+GTY  VY+A++    ++VALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE++  DL        L       +K Y+ QLL GL  CHS  VLHRD+K  NLLI+  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  YY TAVD+WS GCI AE+
Sbjct:    2 ENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.585e-40
Identity = 94/197 (47.72%), Postives = 127/197 (64.47%), Query Frame = 3
Query:   87 EKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            E ++KIG+GTY  VY+ARD    + +ALKK+R +  E E V   A REI +L+ + H N+++L+ +V S     LYLVFEY++ DL   + S P       QVK ++ Q+LCG+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y T VD+WS GCI AE+
Sbjct:    2 ENVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSDKR--LYLVFEYLDLDLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 194          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.070e-40
Identity = 96/207 (46.38%), Postives = 130/207 (62.80%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ---------VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++F+K++KIG+GTY  VY+A++    ++VALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE++  DL         KF +A          +K Y+ QLL GL  CHS  VLHRD+K  NLLI+  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  YY TAVD+WS GCI AE+
Sbjct:    2 ENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFEFLHQDLK--------KFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40
Identity = 89/195 (45.64%), Postives = 124/195 (63.59%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +EKL+KIG+GTY  V++A++ +  +IVALK+VR D+ +        REI +L+ L H N+++L  ++ S     L LVFE+ + DL               VK ++ QLL GL  CHSR VLHRD+K  NLLI+ NG LK+ADFGLA  +     +  ++ VVTLWYRPP++L GA  Y T++D+WS GCI AEL
Sbjct:    4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40
Identity = 89/195 (45.64%), Postives = 124/195 (63.59%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +EKL+KIG+GTY  V++A++ +  +IVALK+VR D+ +        REI +L+ L H N+++L  ++ S     L LVFE+ + DL               VK ++ QLL GL  CHSR VLHRD+K  NLLI+ NG LK+ADFGLA  +     +  ++ VVTLWYRPP++L GA  Y T++D+WS GCI AEL
Sbjct:    4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40
Identity = 89/195 (45.64%), Postives = 124/195 (63.59%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +EKL+KIG+GTY  V++A++ +  +IVALK+VR D+ +        REI +L+ L H N+++L  ++ S     L LVFE+ + DL               VK ++ QLL GL  CHSR VLHRD+K  NLLI+ NG LK+ADFGLA  +     +  ++ VVTLWYRPP++L GA  Y T++D+WS GCI AEL
Sbjct:    4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDL-AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D +EK++KIG+GTY  VY+ARD    + +ALKK+R +  E E V   A REI +L+ + H N+++L+ +V S     LYLVFEY++ DL   + S P        +K ++ Q+L G+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y T VD+WS GCI AE+
Sbjct:    2 DQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--RLYLVFEYLDLDLKKHMDSCPDFAKDPRMIKRFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRQTNALKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 197          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK7_XENLA5.447e-4145.63Cell division protein kinase 7 OS=Xenopus laevis G... [more]
CDK2_BOVIN1.214e-4047.24Cell division protein kinase 2 OS=Bos taurus GN=CD... [more]
CDK2_RAT1.585e-4047.24Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MOUSE1.585e-4047.24Cell division protein kinase 2 OS=Mus musculus GN=... [more]
CDC21_MEDSA1.585e-4047.72Cell division control protein 2 homolog 1 (Fragmen... [more]
CDK2_CRIGR2.070e-4046.38Cell division protein kinase 2 OS=Cricetulus grise... [more]
CDK5_MOUSE3.531e-4045.64Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN3.531e-4045.64Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN3.531e-4045.64Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDC2_CHERU3.531e-4046.50Cell division control protein 2 homolog OS=Chenopo... [more]

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Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
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