CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.531e-40
Identity = 89/198 (44.95%), Postives = 125/198 (63.13%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D+F++ +KIG+GTY  VY+AR     + VALKK+R +  E E V   A REI +L+ L H NV++L  +V S    +LY++FEY+  DL  L       F+   +K YM Q+L  +  CH+  +LHRD+K  NLL+D  G +K+ADFGLA  ++    +  T  VVTLWYR PE+LLG  +Y T VD+WS GCI +E+
Sbjct:    6 DNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEG-ETEGVPSTAIREISLLKNLKHPNVVQLFDVVIS--GNNLYMIFEYLNMDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLLVDTAGKIKLADFGLARAFNVPM-RAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEM 199          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CKD18_RAT (Cell division protein kinase 18 OS=Rattus norvegicus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.612e-40
Identity = 88/200 (44.00%), Postives = 128/200 (64.00%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLV-TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KLDK+G+GTY+ V++ R    + +VALK++R ++ E      + RE+ +L+ L H N++ L  L+ T R   SL LVFEY++ DL     H G   +   VK +M QLL GL +CH R +LHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG+T Y T +D+W  GCIL E+
Sbjct:  117 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDLIHTDR---SLTLVFEYLDSDLKQYLDHCGNLMNMHNVKIFMFQLLRGLAYCHRRKILHRDLKPQNLLINERGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 311          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK18_MOUSE (Cell division protein kinase 18 OS=Mus musculus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.612e-40
Identity = 88/200 (44.00%), Postives = 128/200 (64.00%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLV-TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KLDK+G+GTY+ V++ R    + +VALK++R ++ E      + RE+ +L+ L H N++ L  L+ T R   SL LVFEY++ DL     H G   +   VK +M QLL GL +CH R +LHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG+T Y T +D+W  GCIL E+
Sbjct:  117 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI-REVSLLKDLKHANIVTLHDLIHTDR---SLTLVFEYLDSDLKQYLDHCGNLMNMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEM 311          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC28_ENCCU (Probable cell division control protein 28 homolog OS=Encephalitozoon cuniculi GN=CDC28 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.612e-40
Identity = 87/200 (43.50%), Postives = 125/200 (62.50%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDL---AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +SF+KL+KIG+GTY  VY+AR+ +  ++VALKK+R +N          REI +L+ L H  +++L  ++ +  +  +YLVFEY+E DL       S  G    E  V+   QQLL  +++CHSR + HRD+K  N+L+D    +K+ADFGL         +  T+ VVTLWYRPPELLLG  YY  +VD+WS  CI+AE+
Sbjct:    3 ESFQKLEKIGEGTYGVVYKARERNTNRVVALKKIRLENENEGIPATTIREILLLKNLKHSTIVELSDVIYN--NNKMYLVFEYVELDLRRYLDRMSDEGRLVEEGFVRKMSQQLLTAMEYCHSRNIFHRDLKPQNILVDPKENIKLADFGLGRAAGIPL-RTYTTEVVTLWYRPPELLLGCKYYDASVDVWSAACIMAEV 199          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.023e-40
Identity = 96/207 (46.38%), Postives = 129/207 (62.32%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQ---------VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++F+K++KIG+GTY  VY+A++    ++VALKK+R D  E E V   A REI +L+ L+H N++KL  ++ +     LYLVFE +  DL         KF +A          +K Y+ QLL GL  CHS  VLHRD+K  NLLI+  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG  YY TAVD+WS GCI AE+
Sbjct:    2 ENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK--LYLVFELLHQDLK--------KFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_CARAU (Cell division control protein 2 homolog OS=Carassius auratus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.023e-40
Identity = 93/199 (46.73%), Postives = 125/199 (62.81%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQ-VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D + K++KIG+GTY  VY+ R+    ++VA+KK+R ++ E        REI +L+ L H NV++L  L        LYLVFE++  DL   L S P  +F +   VK Y+ Q+L G+  CH R VLHRD+K  NLLIDN G++K+ADFGLA  +     +  T  VVTLWYR PE+LLGA+ Y T VD+WS G I AEL
Sbjct:    2 DDYLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKELQHPNVVRL--LDVLMQESKLYLVFEFLSMDLKKYLDSIPSGQFMDPMLVKSYLYQILEGILFCHCRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPV-RVYTHEVVTLWYRAPEVLLGASRYSTPVDVWSIGTIFAEL 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.866e-40
Identity = 88/200 (44.00%), Postives = 127/200 (63.50%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLV-TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KLDK+G+GTY+ V++ R    + +VALK++R ++ E      + RE+ +L+ L H N++ L  L+ T R   SL LVFEY++ DL     H G   S   VK +M QLL GL +CH R +LHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG+T Y T +D+W  GCI  E+
Sbjct:  138 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI-REVSLLKNLKHANIVTLHDLIHTDR---SLTLVFEYLDSDLKQYLDHCGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEM 332          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 7.866e-40
Identity = 88/200 (44.00%), Postives = 127/200 (63.50%), Query Frame = 3
Query:   72 RADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLV-TSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +++ KLDK+G+GTY+ V++ R    + +VALK++R ++ E      + RE+ +L+ L H N++ L  L+ T R   SL LVFEY++ DL     H G   S   VK +M QLL GL +CH R +LHRD+K  NLLI+  G LK+ADFGLA        +  ++ VVTLWYRPP++LLG+T Y T +D+W  GCI  E+
Sbjct:  138 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAI-REVSLLKNLKHANIVTLHDLIHTDR---SLTLVFEYLDSDLKQYLDHCGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERGELKLADFGLARAKSV-PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEM 332          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK11_DICDI (PITSVRE serine/threonine protein-kinase cdk11 OS=Dictyostelium discoideum GN=cdk11 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.866e-40
Identity = 86/201 (42.79%), Postives = 127/201 (63.18%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R  D F+KL  I +G +  VY A+D + ++IVALKK++ +  E E +   + REI +L  L H N+++++ +V  +   S+++  E+++HDL GL       F  +++K  +QQLL G+ + H   V+HRD+K +NLL  N G+LKIADFGLA  Y     +PL+  VVTLWYR PELLL    Y  A+D+WS GCI AE+
Sbjct:   47 RSVDCFKKLYTINEGAFGVVYCAQDKETEEIVALKKIKMER-EREGIPITSVREIKVLMELKHDNIVQIKEIVLGKNINSIFMAMEFIDHDLRGLMEVIKKPFLPSEIKTLIQQLLNGVSYMHDNWVIHRDLKTANLLYTNKGVLKIADFGLAREYG-SPLKPLSKGVVTLWYRAPELLLDTEIYTPAIDIWSVGCIFAEI 245          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2A_ANTMA (Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.866e-40
Identity = 93/200 (46.50%), Postives = 128/200 (64.00%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDL-AGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +EK++KIG+GTY  VY+ARD    + +ALKK+R +  E E V   A REI +L+ + H N+++L+ +V S     LYLVFEY++ DL   + S P        VK ++ Q+L G+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y T VD+WS GCI AE+
Sbjct:    2 EQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK--RLYLVFEYLDLDLKKHMDSCPEFSQDPRLVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEM 197          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2C_DROME3.531e-4044.95Cell division control protein 2 cognate OS=Drosoph... [more]
CKD18_RAT4.612e-4044.00Cell division protein kinase 18 OS=Rattus norvegic... [more]
CDK18_MOUSE4.612e-4044.00Cell division protein kinase 18 OS=Mus musculus GN... [more]
CDC28_ENCCU4.612e-4043.50Probable cell division control protein 28 homolog ... [more]
CDK2_MESAU6.023e-4046.38Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDC2_CARAU6.023e-4046.73Cell division control protein 2 homolog OS=Carassi... [more]
CDK18_PONAB7.866e-4044.00Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN7.866e-4044.00Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CDK11_DICDI7.866e-4042.79PITSVRE serine/threonine protein-kinase cdk11 OS=D... [more]
CDC2A_ANTMA7.866e-4046.50Cell division control protein 2 homolog A OS=Antir... [more]

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Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
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