CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: PPK23_SCHPO (Serine/threonine-protein kinase ppk23 OS=Schizosaccharomyces pombe GN=ppk23 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39
Identity = 91/200 (45.50%), Postives = 120/200 (60.00%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRF---MAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D +E L+KI +G+Y  VYR  D     +VALKK++FD   P  + F     REI  L  + H N+++LE +V  +    +YLV E+MEHDL  L  +    F +++VK  M QLL      H    LHRD+K SNLL++N G +K+ADFGLA     +    LT  VVTLWYR PELLLGA  YG  +D+WS GCI AE+
Sbjct:   72 DDYEILEKIEEGSYGIVYRGLDKSTNTLVALKKIKFD---PNGIGFPITSLREIESLSSIRHDNIVELEKVVVGKDLKDVYLVMEFMEHDLKTLLDNMPEDFLQSEVKTLMLQLLAATAFMHHHWYLHRDLKPSNLLMNNTGEIKLADFGLARPVS-EPKSSLTRLVVTLWYRAPELLLGAPSYGKEIDMWSIGCIFAEM 267          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.027e-39
Identity = 89/195 (45.64%), Postives = 123/195 (63.08%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +EKL+KIG+GTY  V++A++ +  +IVALK+VR D+ +        REI +L+ L H N+++L  ++ S     L LVFE+ + DL               VK  + QLL GL  CHSR VLHRD+K  NLLI+ NG LK+ADFGLA  +     +  ++ VVTLWYRPP++L GA  Y T++D+WS GCI AEL
Sbjct:    4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKK--LTLVFEFCDQDLKKYFDSCNGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK7_RAT (Cell division protein kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.342e-39
Identity = 91/202 (45.05%), Postives = 125/202 (61.88%), Query Frame = 3
Query:   75 ADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESV---RFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLA-SFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            A+  EKLD +G+G ++ VY+ARD +  +IVA+KK++  +         R   REI +L+ L H N+I L      + + SL  VF++ME DL  +     L  + + +K YM   L GL++ H   +LHRD+K +NLL+D NG+LK+ADFGLA SF  P  N   T +VVT WYR PELL GA  YG  VD+W+ GCILAEL
Sbjct:    1 ANRNEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL--VFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--NWAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAEL 198          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK11_MOUSE (Cell division protein kinase 11 OS=Mus musculus GN=Cdk11 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.342e-39
Identity = 87/200 (43.50%), Postives = 118/200 (59.00%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R  + F+ L++I +GTY  VYRA+D    +IVALK+++ +  +        REI+ + +  H N++ +  +V       +Y+V  Y+EHDL  L       F   +VK  M QLL G+ H H   +LHRD+K SNLL+ + GILK+ DFGLA  Y     +  T  VVTLWYR PELLLGA  Y TAVD+WS GCI  EL
Sbjct:  422 RSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYG-SPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGEL 620          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.342e-39
Identity = 89/195 (45.64%), Postives = 120/195 (61.54%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +++L+KIG+G+Y  VYRARD+    IVALK++R +++E        REI IL+ L H N+++L  +  S     L LVFEYME DL             A ++ +M+ LL G+  CH R VLHRD+K  NLLI     LK+ADFGL   +     +  T  VVTLWYR P++LLG+T YGT VD+WS GCI AE+
Sbjct:    5 YQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKELRHENIVRLLDVCHSENR--LNLVFEYMEMDLKKYMDRASGNLDPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISREKELKLADFGLGRAFGIPVKK-YTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEM 196          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CD11B_HUMAN (Cell division protein kinase 11B OS=Homo sapiens GN=CDK11B PE=1 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.289e-39
Identity = 87/200 (43.50%), Postives = 118/200 (59.00%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R  + F+ L++I +GTY  VYRA+D    +IVALK+++ +  +        REI+ + +  H N++ +  +V       +Y+V  Y+EHDL  L       F   +VK  M QLL G+ H H   +LHRD+K SNLL+ + GILK+ DFGLA  Y     +  T  VVTLWYR PELLLGA  Y TAVD+WS GCI  EL
Sbjct:  433 RSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYG-SPLKAYTPVVVTLWYRAPELLLGAKEYSTAVDMWSVGCIFGEL 631          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.989e-39
Identity = 88/195 (45.13%), Postives = 123/195 (63.08%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            ++K++KIG+GTY  V++ R+ D  +IVALK+VR D  +        REI +L+ L H N+++L  ++ S     L LVFE+ + DL         +   A  + +M QLL GL  CHS  VLHRD+K  NLLI+ NG LK+ADFGLA  +     +  ++ VVTLWYRPP++L GA  Y T++D+WS GCILAEL
Sbjct:    4 YDKMEKIGEGTYGTVFKGRNRDTMEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKK--LTLVFEHCDQDLKKYFDSLNGEIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAEL 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKA1_ORYSJ (Cyclin-dependent kinase A-1 OS=Oryza sativa subsp. japonica GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 92/200 (46.00%), Postives = 126/200 (63.00%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLID-NNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +EK +KIG+GTY  VYRARD    + +ALKK+R +  E E V   A REI +L+ + H N+++L  ++ S     +YLVFEY++ DL   + S P    +   +K Y+ Q+L G+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLG+  Y T VD+WS GCI AE+
Sbjct:    2 EQYEKEEKIGEGTYGVVYRARDKVTNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMHHGNIVRLHDVIHSEK--RIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGSRQYSTPVDMWSVGCIFAEM 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 85/198 (42.93%), Postives = 127/198 (64.14%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + + K++K+G+GTY  VY+A++ +  +IVALK++R D+ E E V   A REI +L+ L H N+++L  ++ +     L LVFEY++ DL       G + S+  +K +M QLL G+  CH   VLHRD+K  NLLI+  G LK+ADFGLA  +     +  +  VVTLWYR P++L+G+  Y T +D+WS GCI AE+
Sbjct:    2 EKYSKIEKLGEGTYGIVYKAKNRETGEIVALKRIRLDS-EDEGVPCTAIREISLLKELKHPNIVRLHDVIHTERK--LTLVFEYLDQDLKKYLDECGGEISKPTIKSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINRKGELKLADFGLARAFGIPV-RTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEM 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK3_MOUSE (Cell division protein kinase 3 OS=Mus musculus GN=Cdk3 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 96/199 (48.24%), Postives = 128/199 (64.32%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D F+K++KIG+GTY  VY+AR+    ++VALKK+R D LE E V   A REI +L+ L H N+IKL  +V       LY+VFE++  DL   + S P  +     VK Y+ QLL G+  CHS  V+HRD+K  NLL+D  G +K+ADFGLA  +     +  T  VVTLWYR PE+LLG+ +Y TAVD+ S GCI AE+
Sbjct:    2 DVFQKVEKIGEGTYGVVYKARNKVTGQLVALKKIRLD-LEAEGVPSTAVREISLLKELKHPNIIKLLDVVHREKK--LYMVFEFLTQDLKRHMDSSPTSELPLPVVKSYLAQLLEGVSFCHSHRVIHRDLKPQNLLLDGLGAIKLADFGLARAFGVPL-RTYTHEVVTLWYRAPEILLGSKFYSTAVDI-SIGCIFAEM 195          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PPK23_SCHPO1.027e-3945.50Serine/threonine-protein kinase ppk23 OS=Schizosac... [more]
CDK5_RAT1.027e-3945.64Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDK7_RAT1.342e-3945.05Cell division protein kinase 7 (Fragment) OS=Rattu... [more]
CDK11_MOUSE1.342e-3943.50Cell division protein kinase 11 OS=Mus musculus GN... [more]
CC2H1_TRYCO1.342e-3945.64Cell division control protein 2 homolog 1 OS=Trypa... [more]
CD11B_HUMAN2.289e-3943.50Cell division protein kinase 11B OS=Homo sapiens G... [more]
CDK5_DROME2.989e-3945.13Cell division protein kinase 5 homolog OS=Drosophi... [more]
CDKA1_ORYSJ3.904e-3946.00Cyclin-dependent kinase A-1 OS=Oryza sativa subsp.... [more]
CDK5_DICDI3.904e-3942.93Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDK3_MOUSE3.904e-3948.24Cell division protein kinase 3 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
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