CX295708

Overview
NameCX295708
Unique NameCX295708
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length668
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_MAIZE (Cell division control protein 2 homolog OS=Zea mays GN=CDC2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.904e-39
Identity = 92/200 (46.00%), Postives = 127/200 (63.50%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNN-GILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + +EK++KIG+GTY  VY+A D    + +ALKK+R +  E E V   A REI +L+ ++H N+++L  +V S     +YLVFEY++ DL   + S P    +   +K Y+ Q+L G+ +CHS  VLHRD+K  NLLID     LK+ADFGLA  +     +  T  VVTLWYR PE+LLGA  Y T VD+WS GCI AE+
Sbjct:    2 EQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQ-EDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKR--IYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILHGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-RTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEM 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDKD2_ARATH (Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.099e-39
Identity = 88/198 (44.44%), Postives = 121/198 (61.11%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D + +   +G+GTY  VY+A D    K VA+KK+R  N + E V F A REI +L+ L+H ++++L  +       SL+LVFEYM+ DL  +     +  S   +K YM   L GL +CH + VLHRD+K +NLLI  NG+LK+ADFGLA  +    N+  T +V   WYR PELL G+  YG  VD+W+ GCI AEL
Sbjct:   11 DRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGN-QKEGVNFTALREIKLLKELNHPHIVEL--IDAFPHDGSLHLVFEYMQTDLEAVIRDRNIFLSPGDIKSYMLMTLKGLAYCHKKWVLHRDMKPNNLLIGENGLLKLADFGLARLFG-SPNRRFTHQVFATWYRAPELLFGSRQYGAGVDVWAAGCIFAEL 204          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.099e-39
Identity = 86/200 (43.00%), Postives = 117/200 (58.50%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R  + F+ L++I +GTY  VYRA+D    +IVALK+++ +  +        REI+ + +  H N++ +  +V       +Y+V  Y+EHDL  L       F   +VK  M QLL G+ H H   +LHRD+K SNLL+ + GILK+ DFGLA  Y     +  T  VVTLWYR PELLLGA  Y TA D+WS GCI  EL
Sbjct:   74 RSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPLTSIREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLSGVKHLHDNWILHRDLKTSNLLLTHAGILKVGDFGLAREYG-SPLKAYTPVVVTLWYRAPELLLGAKEYSTACDMWSVGCIFGEL 272          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.099e-39
Identity = 85/197 (43.15%), Postives = 120/197 (60.91%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            D + ++D +G+GTY  VYRA D    +IVALKKVR D  +    +   RE+ IL+ + H N++ L  ++ +     LYL+FEY++HDL       G  F+   +K  + QLL GL  CH   ++HRD+K +N+L+  +  +KIADFGLA  +    +   T  VVTLWYR PE+LLG  +Y  AVD+WS GCI AEL
Sbjct:   21 DRYNRMDILGEGTYGVVYRAVDRATGQIVALKKVRLDRTDEGIPQTALREVSILQEIHHPNIVNLLDVICA--DGKLYLIFEYVDHDLKKALEKRGGAFTGTTLKKIIYQLLEGLSFCHRHRIVHRDLKPANILVTTDNSVKIADFGLARAFQIPMH-TYTHEVVTLWYRAPEILLGEKHYTPAVDMWSIGCIFAEL 214          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.659e-39
Identity = 88/195 (45.13%), Postives = 121/195 (62.05%), Query Frame = 3
Query:   84 FEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            +EKL+KIG+GTY  V++ R+ +  +IVALK+VR D  +        REI +L+ L H N+++L  ++ S     L LVFE+ + DL             A  + +M QLL GL  CHS  VLHRD+K  NLLI+ NG LK+ADFGLA  +     +  ++ VVTLWYRPP++L GA  Y T++D+WS GCI AEL
Sbjct:    4 YEKLEKIGEGTYGTVFKGRNRETLEIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKK--LTLVFEHCDQDLKKYFDSLNGDIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-KCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 195          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: YP62_CAEEL (Putative serine/threonine-protein kinase B0495.2 OS=Caenorhabditis elegans GN=B0495.2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.697e-39
Identity = 88/204 (43.14%), Postives = 128/204 (62.75%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMA-REIHILRRL-DHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLA---SHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAE 665
            R  D +E ++++ +GT+  VYR +D    +IVALK+++ +  E E     A REI++L +  +H N++ ++ ++       +Y+  E++EHD+  L    S    +FS  + K  +QQLL G++H H   +LHRD+K SNLL+ + GILKIADFGLA  Y  D  +  TS VVTLWYR PELLLG   Y T VD+WS GCI+AE
Sbjct:  351 RNIDEYECVNRVDEGTFGVVYRGKDKRTDEIVALKRLKMEK-EKEGFPITALREINMLLKAGNHPNIVNVKEILLGSNMDKIYMAMEFVEHDMKSLLDTMSRRNKRFSIGEQKTLLQQLLSGIEHMHKLWILHRDLKTSNLLMSHKGILKIADFGLAREYG-DPLKKFTSIVVTLWYRSPELLLGTRLYSTPVDMWSVGCIMAE 552          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLU (Cell division control protein 2 homolog OS=Oryzias luzonensis GN=cdc2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.697e-39
Identity = 89/199 (44.72%), Postives = 124/199 (62.31%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQ-VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + + K++KIG+GTY  VY+ R     ++VA+KK+R ++ E        RE+ +L+ L H NV++L  L        LYL+FE++  DL   L S P  ++ +   VK Y+ Q+L G+  CH R VLHRD+K  NLLIDN G++K+ADFGLA  +     +  T  VVTLWYR PE+LLG+  Y T VD+WSTG I AEL
Sbjct:    2 EDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRL--LDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAEL 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_ORYLA (Cell division control protein 2 homolog OS=Oryzias latipes GN=cdc2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.697e-39
Identity = 89/199 (44.72%), Postives = 124/199 (62.31%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQ-VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + + K++KIG+GTY  VY+ R     ++VA+KK+R ++ E        RE+ +L+ L H NV++L  L        LYL+FE++  DL   L S P  ++ +   VK Y+ Q+L G+  CH R VLHRD+K  NLLIDN G++K+ADFGLA  +     +  T  VVTLWYR PE+LLG+  Y T VD+WSTG I AEL
Sbjct:    2 EDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRL--LDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAEL 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CDC2_ORYJA (Cell division control protein 2 homolog OS=Oryzias javanicus GN=cdc2 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.697e-39
Identity = 89/199 (44.72%), Postives = 124/199 (62.31%), Query Frame = 3
Query:   78 DSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAG-LASHPGLKFSEAQ-VKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            + + K++KIG+GTY  VY+ R     ++VA+KK+R ++ E        RE+ +L+ L H NV++L  L        LYL+FE++  DL   L S P  ++ +   VK Y+ Q+L G+  CH R VLHRD+K  NLLIDN G++K+ADFGLA  +     +  T  VVTLWYR PE+LLG+  Y T VD+WSTG I AEL
Sbjct:    2 EDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQELKHPNVVRL--LDVLMQESRLYLIFEFLSMDLKKYLDSIPSGQYMDPMLVKSYLYQILEGIYFCHRRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGVPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDVWSTGTIFAEL 197          
BLAST of CX295708 vs. ExPASy Swiss-Prot
Match: CD11A_HUMAN (Cell division protein kinase 11A OS=Homo sapiens GN=CDK11A PE=1 SV=3)

HSP 1 Score: 159.844 bits (403), Expect = 1.136e-38
Identity = 86/200 (43.00%), Postives = 117/200 (58.50%), Query Frame = 3
Query:   69 RRADSFEKLDKIGQGTYSNVYRARDLDQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHINVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFSEAQVKCYMQQLLCGLDHCHSRGVLHRDIKGSNLLIDNNGILKIADFGLASFYDPDQNQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAEL 668
            R  + F+ L++I +GTY  VYRA+D    +IVALK+++ +  +        REI+ + +  H N++ +  +V       +Y+V  Y+EHDL  L       F   +VK  M QLL G+ H H   +LHRD+K SNLL+ + GILK+ DFGLA  Y     +  T  VVT WYR PELLLGA  Y TAVD+WS GCI  EL
Sbjct:  418 RSVEEFQCLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINTILKAQHPNIVTVREIVVGSNMDKIYIVMNYVEHDLKSLMETMKQPFLPGEVKTLMIQLLRGVKHLHDNWILHRDLKTSNLLLSHAGILKVGDFGLAREYG-SPLKAYTPVVVTQWYRAPELLLGAKEYSTAVDMWSVGCIFGEL 616          
The following BLAST results are available for this feature:
BLAST of CX295708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2_MAIZE3.904e-3946.00Cell division control protein 2 homolog OS=Zea may... [more]
CDKD2_ARATH5.099e-3944.44Cyclin-dependent kinase D-2 OS=Arabidopsis thalian... [more]
CDK11_RAT5.099e-3943.00Cell division protein kinase 11 OS=Rattus norvegic... [more]
CC2H3_TRYBB5.099e-3943.15Cell division control protein 2 homolog 3 OS=Trypa... [more]
CDK5_GLOMM6.659e-3945.13Cell division protein kinase 5 homolog OS=Glossina... [more]
YP62_CAEEL8.697e-3943.14Putative serine/threonine-protein kinase B0495.2 O... [more]
CDC2_ORYLU8.697e-3944.72Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYLA8.697e-3944.72Cell division control protein 2 homolog OS=Oryzias... [more]
CDC2_ORYJA8.697e-3944.72Cell division control protein 2 homolog OS=Oryzias... [more]
CD11A_HUMAN1.136e-3843.00Cell division protein kinase 11A OS=Homo sapiens G... [more]

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Properties
Property NameValue
Genbank descriptionC05075A10SK DroRLeaf1 Citrus clementina cDNA clone C05075A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295708 ID=CX295708; Name=CX295708; organism=Citrus clementina; type=EST; length=668bp
GGGTTGCTGCTGGGTGGCCAGCCTGGTTAGCTGCAGTGGCTGGAGAAGCT
ATCCGGGGATGGGTGCCACGGCGTGCGGATTCCTTTGAGAAGCTGGATAA
AATTGGCCAGGGAACTTACAGTAATGTTTATAGGGCTCGTGATCTTGATC
AAAAGAAAATTGTTGCTCTGAAAAAAGTAAGGTTTGATAACCTGGAGCCC
GAGAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTCCGCAGACTTGA
TCACATAAATGTAATAAAGCTGGAAGGCCTCGTTACATCAAGGATGTCTT
GCAGCTTGTATCTTGTTTTTGAGTACATGGAACATGATCTGGCTGGGCTT
GCCTCACATCCGGGACTGAAATTTTCAGAAGCACAGGTTAAATGTTACAT
GCAACAACTTTTGTGCGGGCTTGATCATTGTCATAGCCGTGGAGTCCTTC
ATCGTGATATAAAGGGATCCAACCTTTTAATTGACAACAATGGCATCCTG
AAAATCGCAGACTTTGGCCTGGCTAGTTTTTATGATCCCGATCAAAATCA
GCCTTTGACAAGCCGTGTTGTAACTCTTTGGTACCGGCCACCAGAGCTTT
TATTGGGAGCAACTTACTATGGCACTGCTGTGGATTTATGGAGTACAGGT
TGCATACTTGCAGAATTG
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