CX295716

Overview
NameCX295716
Unique NameCX295716
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P_BRUMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia malayi GN=G3PD PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.229e-35
Identity = 85/213 (39.91%), Postives = 115/213 (53.99%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAY-KPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 638
            V ++++P  +PWG  G + V+E TGVF   + A  H++ GAKKV+I+AP   D P +V+GVN D Y K +  IISNASCTTNCLAP  KV+  KFGII+G MTT H+ T  Q                   NI+P ST                  G+A RVPTP+           K    +E+ AA +E+A+  +KGIL   ++ +VS DF
Sbjct:   80 VHNSKDPAEIPWGVDGAEYVVESTGVFTTTDKASAHLKGGAKKVIISAPS-ADAPMFVMGVNNDMYDKANNHIISNASCTTNCLAPLAKVIHDKFGIIEGLMTTVHATTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPGLNGKLTGMANRVPTPDVSVVDLTCRLQKGATMDEIKAAVKEAANGPMKGILEYTEDQVVSTDF 291          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P3_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluyveromyces marxianus GN=GAP3 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.229e-35
Identity = 84/212 (39.62%), Postives = 114/212 (53.77%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 638
            V   R+P  LPWG   ID+ I+ TG+F + + A KHI AGAKKV+ITAP     P +VVGVN D Y   + I+SNASCTTNCLAP  K+++  FGI +G MTT HS T  Q                   NI+P+ST                  G+A RVPT +          +K    EE+ A  +++++NELKG++   ++ +VS DF
Sbjct:   74 VFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAP-SSTAPMFVVGVNEDKY-AGQTIVSNASCTTNCLAPLAKIINNAFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLAKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDF 283          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P2_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluyveromyces marxianus GN=GAP2 PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.229e-35
Identity = 84/212 (39.62%), Postives = 114/212 (53.77%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 638
            V   R+P  LPWG   ID+ I+ TG+F + + A KHI AGAKKV+ITAP     P +VVGVN D Y   + I+SNASCTTNCLAP  K+++  FGI +G MTT HS T  Q                   NI+P+ST                  G+A RVPT +          +K    EE+ A  +++++NELKG++   ++ +VS DF
Sbjct:   74 VFQERDPATLPWGAEKIDIAIDSTGIFKELDSAQKHIDAGAKKVVITAP-SSTAPMFVVGVNEDKY-AGQTIVSNASCTTNCLAPLAKIINNAFGIEEGLMTTVHSITATQKTVDGPSHKDWRGGRTASGNIIPSSTGAAKAVGKVLPELQGKLTGMAFRVPTVDVSVVDLTVKLAKPATYEEIKAVVKKASENELKGVMGYTEDAVVSSDF 283          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P_PHACH (Glyceraldehyde-3-phosphate dehydrogenase OS=Phanerochaete chrysosporium GN=GPD PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 80/212 (37.74%), Postives = 111/212 (52.36%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 638
            V + ++P N+PWG +G + ++E TGVF   E A  H++   KKV+I+AP   D P +V GVN DAY     +ISNASCTTNCLAP  KV+  KFGI++G MT+ H+ T  Q                   NI+P+ST                 NG+A RVPT +           K    +E+  A +E+++   KGIL   +E +VS DF
Sbjct:   75 VFAEKDPANIPWGSVGAEYIVESTGVFTTTEKASAHLKGVCKKVIISAPS-ADAPMFVCGVNLDAYDSKYKVISNASCTTNCLAPLAKVIHDKFGIVQGLMTSVHATTATQKTVDGPSNKDWLGGRSVGNNIIPSSTGAAKAVGKVIPSLNGKLNGLAFRVPTVDVSVVDLVVRLEKPASYDEIKQAIKEASETTHKGILGYTEEKVVSTDF 285          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P_CRYPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Cryphonectria parasitica PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 80/209 (38.28%), Postives = 111/209 (53.11%), Query Frame = 3
Query:   12 SNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 635
            + R+P  +PW + G D ++E TGVF   E A  H++ GAKKV+I+AP   D P YV+GVN   Y     +ISNASCTTNCLAP  KV++ +F II+G MTT HSYT  Q                   NI+P+ST                  G+++RVPT N           K    E++  A +++AD  LKG+L+  ++ +VS D
Sbjct:   77 TERDPAAIPWSETGADYIVESTGVFTTTEKAKAHLKGGAKKVIISAPS-ADAPMYVMGVNEKTYDGSGMVISNASCTTNCLAPLAKVINDEFKIIEGLMTTVHSYTATQKTVDGPSAKDWRGGRTAAQNIIPSSTGAAKAVGKVIPELNGKLTGMSMRVPTSNVSVVDLTVRIEKGATYEQIKTAVKKAADGPLKGVLAYTEDDVVSTD 284          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 1.606e-35
Identity = 80/212 (37.74%), Postives = 109/212 (51.42%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 638
            +   R+P N+ W D G + V+E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN + Y     I+SNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    +++    + +AD  LKGIL+  ++ +VS DF
Sbjct:   74 IFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILAYTEDQVVSCDF 284          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35
Identity = 84/211 (39.81%), Postives = 110/211 (52.13%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 635
            V S ++P NLPW +  ID+V+E TG FV  EGA  H+QAGAK+V+I+AP K   I T V  VN      ++ IIS ASCTTNCLAP V VL++ FGI+ GTM T H+YT DQ                  NIVPT+T                 NG+ALRVP              K    E++N A +++A    +     C++ +VS D
Sbjct:   79 VFSEKDPANLPWAEHNIDIVVESTGRFVSEEGASLHLQAGAKRVIISAPAKQKTIKTVVYNVNHKIINAEDKIISAASCTTNCLAPMVHVLEKNFGILHGTMVTVHAYTADQRLQDAPHSDLRRARAAACNIVPTTTGAAKAIGLVVPEATGKLNGMALRVPVLTGSIVELCVALEKDATVEQINQAMKKAASASFR----YCEDEIVSSD 285          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P_MYCGE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma genitalium GN=gapA PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35
Identity = 87/211 (41.23%), Postives = 109/211 (51.66%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-IPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVD 635
            V S ++P NLPW +  ID+VIE TG FV  EGA  H++AGAK+V+I+AP K   I T V  VN      D+ IIS ASCTTNCLAP V VL++ FGI+ GTM T H+YT DQ                  NIVPT+T                 NG++LRVP              K    E+VN A +  A    K     C++P+VS D
Sbjct:   79 VFSEKDPQNLPWDEHDIDVVIESTGRFVSEEGASLHLKAGAKRVIISAPAKEKTIRTVVYNVNHKTISSDDKIISAASCTTNCLAPLVHVLEKNFGIVYGTMLTVHAYTADQRLQDAPHNDLRRARAAAVNIVPTTTGAAKAIGLVVPEANGKLNGMSLRVPVLTGSIVELSVVLEKSPSVEQVNQAMKRFASASFK----YCEDPIVSSD 285          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3P_CHICK (Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus gallus GN=GAPDH PE=2 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35
Identity = 80/212 (37.74%), Postives = 108/212 (50.94%), Query Frame = 3
Query:    6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 638
            +   R+P N+ W D G + V+E TGVF   E AG H++ GAK+V+I+AP   D P +V+GVN + Y     I+SNASCTTNCLAP  KV+   FGI++G MTT H+ T  Q                   NI+P ST                  G+A RVPTPN           K    +++    + +AD  LKGIL   ++ +VS DF
Sbjct:   74 IFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDF 284          
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PC_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Chlamydomonas reinhardtii GN=GAPC PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.097e-35
Identity = 86/208 (41.35%), Postives = 112/208 (53.85%), Query Frame = 3
Query:   21 NPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKP-DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ-XXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDF 638
            +P  + WG  G D+VIE TGVF D   A  H+  GAKKV+ITAP   D P YV+GVN + Y P  + IISNASCTTNCLAP  KV++ KFGI +G MTT H+ T  Q                   NI+P+ST                  G+A RVPT +           K T  E++  A +E+++ E+KG+L+  DE +VS DF
Sbjct:   82 DPSKINWGAAGADIVIESTGVFTDIAKATAHLTGGAKKVIITAPSN-DAPMYVMGVNHEKYNPATDHIISNASCTTNCLAPLAKVVNSKFGIKEGLMTTVHATTATQKTVDGPSKKDWRGGRAVNGNIIPSSTGAAKAVGKVLPELKGKLTGMAFRVPTNDVSVVDLTVTLEKATTYEDIMKALKEASEGEMKGVLAYTDEDVVSSDF 288          
The following BLAST results are available for this feature:
BLAST of CX295716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
G3P_BRUMA1.229e-3539.91Glyceraldehyde-3-phosphate dehydrogenase OS=Brugia... [more]
G3P3_KLUMA1.229e-3539.62Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Kluy... [more]
G3P2_KLUMA1.229e-3539.62Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Kluy... [more]
G3P_PHACH1.606e-3537.74Glyceraldehyde-3-phosphate dehydrogenase OS=Phaner... [more]
G3P_CRYPA1.606e-3538.28Glyceraldehyde-3-phosphate dehydrogenase OS=Crypho... [more]
G3P_COLLI1.606e-3537.74Glyceraldehyde-3-phosphate dehydrogenase OS=Columb... [more]
G3P_MYCPN2.097e-3539.81Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P_MYCGE2.097e-3541.23Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P_CHICK2.097e-3537.74Glyceraldehyde-3-phosphate dehydrogenase OS=Gallus... [more]
G3PC_CHLRE2.097e-3541.35Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionC05075B06SK DroRLeaf1 Citrus clementina cDNA clone C05075B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295716 ID=CX295716; Name=CX295716; organism=Citrus clementina; type=EST; length=685bp
GAGGGGTTGTTTCTAACCGCAACCCCGTCAATCTCCCCTGGGGGGACTTG
GGCATCGACCTTGTGATTGAAGGGACAGGAGTGTTTGTAGACAGAGAGGG
TGCGGGCAAGCACATTCAGGCTGGTGCCAAGAAAGTACTTATTACAGCCC
CCGGCAAGGGTGACATCCCAACCTACGTTGTTGGTGTCAATGCGGATGCT
TACAAGCCAGATGAGCCCATCATCAGCAATGCTTCTTGCACAACCAACTG
CCTTGCCCCATTCGTCAAGGTTCTTGACCAGAAGTTTGGCATTATCAAGG
GAACCATGACCACCACACACTCGTACACTGGCGACCAAAGGCTACTCGAT
GCTAGCCACCGTGACCTCAGGCGTGCAAGAGCAGCTGCACTCAACATTGT
CCCAACATCAACTGGTGCGGCAAAAGCTGTGGCCCTTGTCCTCCCAGCAC
TCAAAGGCAAACTAAACGGCATTGCCCTTCGTGTGCCAACACCAAACGTC
TCGGTTGTTGATCTTGTCGTTCAGGTGTCGAAGAAAACCTTCGCAGAAGA
GGTGAACGCCGCTTTCAGAGAAAGCGCTGACAATGAACTGAAAGGGATCC
TCTCCGTGTGCGACGAGCCCCTCGTTTCGGTCGACTTCAGGTGCTCTGAT
GTATCCTCAACCGTTGATTCATCTCTCACACTTGT
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