CX295716
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPA PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.026e-82 Identity = 158/213 (74.18%), Postives = 161/213 (75.59%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVS+RNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNAD Y PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST + LRVPTPN SKKTFAEEVNAAFRE+AD ELKGIL VCDEPLVSVDFRC Sbjct: 132 VVSDRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADLYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALSSQALRGSSMALPLRVPTPNVSVVDLVVQVSKKTFAEEVNAAFREAADKELKGILDVCDEPLVSVDFRC 344
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_SPIOL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Spinacia oleracea GN=GAPA PE=1 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 1.936e-81 Identity = 155/213 (72.77%), Postives = 162/213 (76.06%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVS+RNPVNLPWGD+GIDLVIEGTGVFVDR+GAGKH+QAGAKKVLITAPGKGDIPTYVVGVN + Y + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN SKKTFAEEVNAAFRESADNELKGILSVCDEPLVS+DFRC Sbjct: 141 VVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLITAPGKGDIPTYVVGVNEEGYTHADTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAACLNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSIDFRC 353
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_ARATH (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Arabidopsis thaliana GN=GAPA PE=1 SV=3) HSP 1 Score: 300.056 bits (767), Expect = 7.355e-81 Identity = 155/213 (72.77%), Postives = 161/213 (75.59%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVSNRNP LPW +LGID+VIEGTGVFVDREGAGKHI+AGAKKV+ITAPGKGDIPTYVVGVNADAY DEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN SKKTFAEEVNAAFR+SA+ ELKGIL VCDEPLVSVDFRC Sbjct: 136 VVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVIITAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDSAEKELKGILDVCDEPLVSVDFRC 348
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_MAIZE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Zea mays GN=GAPA PE=2 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 1.255e-80 Identity = 155/213 (72.77%), Postives = 159/213 (74.65%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVS+RNP NLPWG+LGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNAD Y PDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN SKKT AEEVN AFR++A NEL GIL VCD PLVSVDFRC Sbjct: 143 VVSDRNPSNLPWGELGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADQYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTLAEEVNQAFRDAAANELTGILEVCDVPLVSVDFRC 355
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_PEA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Pisum sativum GN=GAPA PE=2 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 4.462e-78 Identity = 153/213 (71.83%), Postives = 157/213 (73.71%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVS+RNP NLPW +LGIDLVIEGTGVFVDREGAG+HI AGAKKVLITAPGKGDIPTYVVGVNADAY + IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN SKKTFAEEVN AFRESA EL GILSVCDEPLVSVDFRC Sbjct: 145 VVSDRNPANLPWKELGIDLVIEGTGVFVDREGAGRHITAGAKKVLITAPGKGDIPTYVVGVNADAYTHADDIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPTLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRESAAKELTGILSVCDEPLVSVDFRC 357
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_SCEVA (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Scenedesmus vacuolatus GN=GapA PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.591e-67 Identity = 133/214 (62.15%), Postives = 148/214 (69.16%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVS+R+P LPWG++ IDLVIEGTGVF+D GA KHI+AGAKKVLITAP KG DIPTYVVGVNA YK + IISNASCTTNCLAPFVKVLD+KFGI+KGTMT THSYTGDQ NIVPT+T NGIALRVPTPN KKTFAEE+N AF+E+A L G+L+V DEPLVSVDFRC Sbjct: 70 VVSSRDPTKLPWGEMEIDLVIEGTGVFIDTPGASKHIEAGAKKVLITAPAKGSDIPTYVVGVNAHDYKHSDAIISNASCTTNCLAPFVKVLDEKFGIVKGTMTNTHSYTGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVPTPNVSVVDLVVQVEKKTFAEEINNAFKEAAAGSLNGVLAVSDEPLVSVDFRC 283
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_CHLRE (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic OS=Chlamydomonas reinhardtii GN=GAPA PE=1 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.918e-66 Identity = 130/214 (60.75%), Postives = 149/214 (69.63%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 +VS+R+P+ LPW ++ IDLVIEGTGVF+D+ GAGKHIQAGA KVLITAP K DIPT+VVGVN YK + PIISNASCTTNCLAPFVKVL+QKFGI+KGTMTTTHSYTGDQ NIVPT+T NGIALRVPTP KKTFAEEVNAAFRE+A+ +KG+L V D PLVS+DF+C Sbjct: 112 IVSSRDPLQLPWKEMNIDLVIEGTGVFIDKVGAGKHIQAGASKVLITAPAKDKDIPTFVVGVNEGDYKHEYPIISNASCTTNCLAPFVKVLEQKFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTTTGAAKAVSLVLPSLKGKLNGIALRVPTPTVSVVDLVVQVEKKTFAEEVNAAFREAANGPMKGVLHVEDAPLVSIDFKC 325
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PB_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GAPB PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 8.729e-66 Identity = 134/216 (62.04%), Postives = 151/216 (69.91%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVS+R+P+ LPW +LGID+VIEGTGVFVD GAGKHIQAGAKKV+ITAP KG DIPTYVVGVN Y + IISNASCTTNCLAPFVKV+D++ GI+KGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN +KK AE+VNAAFR++AD LKG+L+VCDEPLVSVDFRC Sbjct: 129 VVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVVGVNEQDYSHEVADIISNASCTTNCLAPFVKVMDEELGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGITAEDVNAAFRKAADGPLKGVLAVCDEPLVSVDFRC 344
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PB_PEA (Glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic OS=Pisum sativum GN=GAPB PE=2 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 1.260e-64 Identity = 133/216 (61.57%), Postives = 149/216 (68.98%), Query Frame = 3 Query: 6 VVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKG-DIPTYVVGVNADAYKPD-EPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTF-AEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 VVS+R+P+ LPW +LGID+VIEGTGVFVD GAGKHIQAGAKKV+ITAP KG DIPTYV+GVN Y + IISNASCTTNCLAPF KVLD++FGI+KGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN +KK AE+VNAAFR++A+ LKGIL VCD PLVSVDFRC Sbjct: 160 VVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKVIITAPAKGADIPTYVIGVNEQDYGHEVADIISNASCTTNCLAPFAKVLDEEFGIVKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFRKAAEGPLKGILDVCDVPLVSVDFRC 375
BLAST of CX295716 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 1.646e-64 Identity = 128/185 (69.19%), Postives = 134/185 (72.43%), Query Frame = 3 Query: 90 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQXXXXXXXXXXXXXXXXXXNIVPTSTXXXXXXXXXXXXXXXXXNGIALRVPTPNXXXXXXXXXXSKKTFAEEVNAAFRESADNELKGILSVCDEPLVSVDFRC 644 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNA+ Y ++ IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQ NIVPTST NGIALRVPTPN SKKTFAEEVNAAFR++A+ ELKGIL VCDEPLVSVDFRC Sbjct: 1 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRDAAEKELKGILDVCDEPLVSVDFRC 185 The following BLAST results are available for this feature:
BLAST of CX295716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295716 ID=CX295716; Name=CX295716; organism=Citrus clementina; type=EST; length=685bpback to top |