CX295831

Overview
NameCX295831
Unique NameCX295831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: NED4L_HUMAN (E3 ubiquitin-protein ligase NEDD4-like OS=Homo sapiens GN=NEDD4L PE=1 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 5.003e-33
Identity = 77/188 (40.96%), Postives = 119/188 (63.30%), Query Frame = 2
Query:   53 DFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQD-LKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNNASFQPNPNS-VYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDAD 607
            +F  K  YFR K+++  +  +     + + R  + E+SY ++      D LK RL + F+ E+G+D GG+ REW+ LLS+ +F+    LF  +  +N + Q NPNS +   +HLSYF F+GRV   A+F G+LLD  F R FYK MLG ++T +D+E+VD +YY +LKW+LEND +++ DL F +D +
Sbjct:  596 EFKQKYDYFRKKLKKPAD--IPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIGRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDPTEL-DLMFCIDEE 780          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: HACE1_XENLA (E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevis GN=hace1 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.535e-33
Identity = 66/158 (41.77%), Postives = 103/158 (65.19%), Query Frame = 2
Query:  137 VRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDAD 607
            V R  +   S   +   + + LK  + V F GEEG+  G + REW+ +LS  + +    LFT   +  +FQPN NS    +HL+YF+F G ++  AL+  QL++++FTRSFYKH+LG+ V Y D+ ++DP+Y KNL+W+L+ND+SD+  +LTFS++ D
Sbjct:  592 VHRDSIFRSSCEVVFKSNCEKLKQGIAVRFHGEEGMGQG-VVREWFDILSSEMINPDYALFTQSADGTTFQPNSNSSVNPDHLNYFRFAGEILGLALYHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETD 748          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: SUDX_DROME (E3 ubiquitin-protein ligase Su(dx) OS=Drosophila melanogaster GN=Su(dx) PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33
Identity = 83/217 (38.25%), Postives = 124/217 (57.14%), Query Frame = 2
Query:   68 RAY---FRSKIRQQH----EQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVG-NNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADEEKHILYEKTEVTDYELNLEEEHRVTEE 691
            RAY   FR K+ Q         L   ++I+V R  + EDSY+Q+      +L+ RL + F+GEEG+D GG++REW+ LLS  + +    LF     NN S Q NP S    +HL YFKF+GR +A AL+ G+ +   FT  FYK ML  K+T  DIE +DP++Y +L W+ +N++ +   +L FS+D +    I++ + +         E+ RVTEE
Sbjct:  568 RAYERSFRWKLSQFRYLCQSNALPSHIKITVTRQTLFEDSYHQIMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFSVDFEVLGQIIHHELKENG------EKERVTEE 778          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: SMUF2_DANRE (E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio GN=smurf2 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33
Identity = 76/184 (41.30%), Postives = 109/184 (59.24%), Query Frame = 2
Query:   53 DFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNA-SFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMD 601
            D   K    R ++ QQ  Q  +G  RI V R  + E+SY Q+     +DL  RL V F+GEEG+D GG+ REW  LLS  + +    LF    ++  + Q NP+S    EHLSYF FVGR++  A+F G  +D  FT  FYK +LG  +T  D+E+VDPD + +L W+L+ND++ + D TF ++
Sbjct:  388 DLVQKLKILRQELSQQQPQ--AGHCRIEVSREEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVE 569          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.115e-32
Identity = 67/158 (42.41%), Postives = 102/158 (64.56%), Query Frame = 2
Query:  137 VRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDAD 607
            V R  +   S   +   +   LK  + V F GEEG+  G + REW+ +LS  I +    LFT   +  +FQPN NS    +HL+YF+F G+++  AL   QL++++FTRSFYKH+LG+ V Y D+ ++DP+Y KNL+W+L+ND+SD+  +LTFS++ D
Sbjct:  557 VHRDSIFRSSCEVVSKANCAKLKQGIAVRFHGEEGMGQG-VVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETD 713          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.456e-32
Identity = 67/158 (42.41%), Postives = 102/158 (64.56%), Query Frame = 2
Query:  137 VRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDAD 607
            V R  +   S   +   +   LK  + V F GEEG+  G + REW+ +LS  I +    LFT   +  +FQPN NS    +HL+YF+F G+++  AL   QL++++FTRSFYKH+LG+ V Y D+ ++DP+Y KNL+W+L+ND+SD+  +LTFS++ D
Sbjct:  557 VHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQG-VVREWFDILSNEIVNPDYALFTQSADGTTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASIDPEYAKNLQWILDNDISDLGLELTFSVETD 713          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: SMUF1_XENLA (E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laevis GN=smurf1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32
Identity = 73/192 (38.02%), Postives = 113/192 (58.85%), Query Frame = 2
Query:  107 QHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEHR 679
            Q  +G  R+ V R  + E+SY Q+     +DLK RL V F+GEEG+D GG+ REW  LL   + +    LF  +  N  + Q NP+S    +HLSYF FVGR++  A+F G  ++  FT  FYK +LG  +   D+E+VDP+ +K+L W+LEND++ + D TF ++ +    +L  + +     L + EE++
Sbjct:  367 QPQAGHCRVEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITSVLDHTFCVEHNAFGRLLQHELKPNGKNLQVTEENK 558          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: SMUF1_MOUSE (E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus GN=Smurf1 PE=1 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.901e-32
Identity = 78/210 (37.14%), Postives = 119/210 (56.67%), Query Frame = 2
Query:   53 DFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEHR 679
            D   K    R ++  Q  Q  +G  RI V R  + E+SY Q+     +DLK RL V F+GEEG+D GG+ REW  LL   + +    LF  +  N  + Q NP+S    +HLSYF FVGR++  A+F G  ++  FT  FYK +LG  +   D+E+VDP+ +K+L W+LEND++ + D TF ++ +    IL  + +     + + EE++
Sbjct:  351 DLVQKLKVLRHELSLQQPQ--AGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENK 558          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: SMUF1_HUMAN (E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens GN=SMURF1 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.243e-32
Identity = 78/210 (37.14%), Postives = 118/210 (56.19%), Query Frame = 2
Query:   53 DFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEHR 679
            D   K    R ++  Q  Q  +G  RI V R  + E+SY Q+     +DLK RL V F+GEEG+D GG+ REW  LL   + +    LF  +  N    Q NP+S    +HLSYF FVGR++  A+F G  ++  FT  FYK +LG  +   D+E+VDP+ +K+L W+LEND++ + D TF ++ +    IL  + +     + + EE++
Sbjct:  377 DLVQKLKVLRHELSLQQPQ--AGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENK 584          
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: SMUF1_DROME (E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster GN=lack PE=1 SV=3)

HSP 1 Score: 137.502 bits (345), Expect = 7.225e-32
Identity = 77/210 (36.67%), Postives = 121/210 (57.62%), Query Frame = 2
Query:   53 DFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEHR 679
            D   K    R++++    Q  SG  R+ V R  + E+SY  +     +D++ RL V F+GEEG+D GG+ REW  LLSR + +    LF  +  ++ + Q NP+S    +HLSYF FVGR +  A+F G  LD  FT  FYK +L   +T  DIE VDPD +++L WMLE+++S I + TFS++ +    ++  + +     + + EE++
Sbjct:  680 DLVGKLRALRTELQTMQPQ--SGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGIIESTFSVENNSFGALVVHELKPGGASIPVTEENK 887          
The following BLAST results are available for this feature:
BLAST of CX295831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
NED4L_HUMAN5.003e-3340.96E3 ubiquitin-protein ligase NEDD4-like OS=Homo sap... [more]
HACE1_XENLA6.535e-3341.77E3 ubiquitin-protein ligase HACE1 OS=Xenopus laevi... [more]
SUDX_DROME8.535e-3338.25E3 ubiquitin-protein ligase Su(dx) OS=Drosophila m... [more]
SMUF2_DANRE8.535e-3341.30E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio ... [more]
HACE1_HUMAN1.115e-3242.41E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens ... [more]
HACE1_MOUSE1.456e-3242.41E3 ubiquitin-protein ligase HACE1 OS=Mus musculus ... [more]
SMUF1_XENLA1.901e-3238.02E3 ubiquitin-protein ligase SMURF1 OS=Xenopus laev... [more]
SMUF1_MOUSE1.901e-3237.14E3 ubiquitin-protein ligase SMURF1 OS=Mus musculus... [more]
SMUF1_HUMAN3.243e-3237.14E3 ubiquitin-protein ligase SMURF1 OS=Homo sapiens... [more]
SMUF1_DROME7.225e-3236.67E3 ubiquitin-protein ligase Smurf1 OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionC05076D02SK DroRLeaf1 Citrus clementina cDNA clone C05076D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295831 ID=CX295831; Name=CX295831; organism=Citrus clementina; type=EST; length=738bp
TAGTTTGTTGGAGAAATCACTATCTATGATGCTGAAGGCCCCAAGGCTGA
TTGACTTTGACAACAAGAGAGCGTATTTCCGCTCAAAAATAAGGCAACAA
CATGAACAACACCTCTCAGGCCCACTGCGAATCAGTGTTCGACGGGCATA
TGTTTTAGAGGATTCATACAATCAACTGCGGATGCGGTCCACTCAAGATT
TAAAAGGGAGATTGAATGTGCATTTTCAAGGTGAAGAGGGTATTGATGCT
GGAGGTCTGACGAGAGAATGGTATCAATTACTGTCCAGGGTTATATTCGA
CAAAGGGGCGTTGCTTTTCACCACTGTGGGCAACAATGCATCTTTTCAGC
CAAACCCCAATTCTGTCTACCAAACGGAGCATCTCTCGTACTTCAAATTT
GTGGGCCGTGTGGTTGCCAAGGCTCTATTTGATGGTCAGCTTTTGGATGT
TCATTTTACTAGGTCCTTCTATAAGCACATGCTAGGTGTAAAGGTGACTT
ATCATGACATAGAGGCTGTTGACCCTGATTATTACAAGAATTTGAAGTGG
ATGCTGGAGAATGATGTGAGTGACATACCTGACCTGACATTCAGCATGGA
TGCTGATGAGGAAAAGCACATTCTGTATGAGAAAACTGAGGTTACTGATT
ATGAGCTTAACCTGGAGGAAGAACATAGGGTTACGGAAGAACAAACATGA
GTATGTAGACCTGTGGCTGATCATATCTGACAAATGCA
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