CX295831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: UPL2_ARATH (E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana GN=UPL2 PE=1 SV=2) HSP 1 Score: 402.519 bits (1033), Expect = 1.204e-111 Identity = 203/232 (87.50%), Postives = 215/232 (92.67%), Query Frame = 2 Query: 38 APRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEH-RVTEE-QT*VCRPVADHI 727 APRLIDFDNK+AYFRS+IR QH+QH+SGPLRISVRRAYVLEDSYNQLRMRS QDLKGRLNV FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN+A+FQPNPNSVYQTEHLSYFKFVGR+VAKALFDGQLLDV+FTRSFYKH+LGVKVTYHDIEAVDPDYYKNLKW+LENDVSDI DLTFSMDADEEKHILYEKTEVTDYEL + RVTEE + VADHI Sbjct: 3267 APRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLVADHI 3498
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: UPL1_ARATH (E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana GN=UPL1 PE=1 SV=3) HSP 1 Score: 401.749 bits (1031), Expect = 2.054e-111 Identity = 198/219 (90.41%), Postives = 209/219 (95.43%), Query Frame = 2 Query: 38 APRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEH-RVTEE 691 APRLIDFDNK+AYFRS+IR QH+QH+SGPLRISVRRAYVLEDSYNQLRMRS QDLKGRLNV FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN+A+FQPNPNSVYQTEHLSYFKFVGR+VAKALFDGQLLDV+FTRSFYKH+LGVKVTYHDIEAVDPDYYKNLKW+LENDVSDI DLTFSMDADEEKHILYEKTEVTDYEL + RVTEE Sbjct: 3290 APRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEE 3508
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: TOM1_NEUCR (E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa GN=B11B22.010 PE=3 SV=3) HSP 1 Score: 198.749 bits (504), Expect = 2.641e-50 Identity = 93/193 (48.19%), Postives = 138/193 (71.50%), Query Frame = 2 Query: 41 PRLIDFDNKRAYFRSKIRQQHEQ--HLSGPLRISVRRAYVLEDSYNQLRMRSTQDLK-GRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNN-ASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDAD 607 P++++FDNKR YF + +++Q H PL++ VRR +V DS+ L + +LK G+LN+ FQGEEG+DAGG+TREW+Q+LSR +FD +LF V ++ +F PN S EHL +FKF+GR++ KAL++G+LL+ +F+R+ YK +LG V+ D+E+ DPDYYK+L WMLEND++DI TFS++ D Sbjct: 3639 PKVLEFDNKRNYFNRSVHSKYQQTRHSFPPLQLQVRREHVFHDSFRSLYYKKADELKFGKLNIRFQGEEGVDAGGVTREWFQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLECYFSRAVYKRILGKPVSVKDMESFDPDYYKSLVWMLENDITDIITETFSVEDD 3831
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: PTR1_SCHPO (E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe GN=ptr1 PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.504e-49 Identity = 95/203 (46.80%), Postives = 139/203 (68.47%), Query Frame = 2 Query: 41 PRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLK-GRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEV 643 P++++F+NKR YF ++ ++ + PL I+VRR +V DSY L + ++K +LN+HF+ EEG+DAGG+TREW Q+L+R +F+ LF V G+ +F PN +S +HLS+FKF GR++ KAL+DG+LLD HF+R+ YKHML V+ DIE++DPDYYK+L WML ND++DI F++ EK + EKT V Sbjct: 2842 PKVLEFENKRNYFNRQLHEEAAKEQYPPLNITVRRDHVFLDSYRALHFKDADEVKFSKLNIHFRDEEGVDAGGVTREWLQVLARQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLHRSVSVKDIESLDPDYYKSLVWMLNNDITDIITEEFAV----EKDVFGEKTVV 3040
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: HUWE1_MOUSE (E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus GN=Huwe1 PE=1 SV=4) HSP 1 Score: 184.496 bits (467), Expect = 5.154e-46 Identity = 93/191 (48.69%), Postives = 132/191 (69.11%), Query Frame = 2 Query: 44 RLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADE 610 R++DFD KR YFR ++ + E + + VRR +V EDSY +L +S +++K RL + F+GEEG DAGGL REWY ++SR +F+ LF T+ G+ ++ NP+S HLSYFKFVGR+VAKA++D +LL+ +FTRSFYKH+LG V Y D+E+ D +Y+ L ++LENDVS + DLTFS + E Sbjct: 3993 RVLDFDVKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQE 4183
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: HUWE1_HUMAN (E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens GN=HUWE1 PE=1 SV=3) HSP 1 Score: 184.496 bits (467), Expect = 5.154e-46 Identity = 93/191 (48.69%), Postives = 132/191 (69.11%), Query Frame = 2 Query: 44 RLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF-TTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIP-DLTFSMDADE 610 R++DFD KR YFR ++ + E + + VRR +V EDSY +L +S +++K RL + F+GEEG DAGGL REWY ++SR +F+ LF T+ G+ ++ NP+S HLSYFKFVGR+VAKA++D +LL+ +FTRSFYKH+LG V Y D+E+ D +Y+ L ++LENDVS + DLTFS + E Sbjct: 3990 RVLDFDVKRKYFRQELERLDEGLRKEDMAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNPMYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHILGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQE 4180
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: TOM1_ASHGO (Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii GN=TOM1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.958e-45 Identity = 91/192 (47.40%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 41 PRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLK-GRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNN-ASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADE 610 P+++DFDNKR YF +++R H L ISVRR +V DSY L +S +D+K +L + F+GE G+DAGG+TREWYQ+LSR +F+ LF V ++ +F+PN S EHLS+FKF+G ++ KA+ D LD HF+R YK++LG V D+E++D DYYK+L W+LEND++DI + TFS++ D+ Sbjct: 2875 PKILDFDNKRYYFTAQLRAI--THDRPKLSISVRREHVFLDSYRSLFFKSNEDIKISKLEISFKGEAGVDAGGITREWYQVLSRQMFNPDYALFIPVASDKTTFRPNRTSGINPEHLSFFKFIGMIIGKAISDQCFLDCHFSREVYKNILGKPVALKDMESLDLDYYKSLIWILENDITDIIEETFSVETDD 3064
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: TOM1_YEAST (E3 ubiquitin-protein ligase TOM1 OS=Saccharomyces cerevisiae GN=TOM1 PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.442e-45 Identity = 87/192 (45.31%), Postives = 132/192 (68.75%), Query Frame = 2 Query: 41 PRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKG-RLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTV-GNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADE 610 P+++DFDNKR +F +K++ +++ P I+VRR V DSY L ++ ++K +L + F+GE G+DAGG+TREWYQ+LSR +F+ LF V + +F PN S EHLS+FKF+G ++ KA+ D LD HF+R YK++LG V+ D+E++DPDYYK+L W+LEND++DI + TFS++ D+ Sbjct: 2885 PKVLDFDNKRYFFNAKLKSDNQERPKLP--ITVRREQVFLDSYRALFFKTNDEIKNSKLEITFKGESGVDAGGVTREWYQVLSRQMFNPDYALFLPVPSDKTTFHPNRTSGINPEHLSFFKFIGMIIGKAIRDQCFLDCHFSREVYKNILGRPVSLKDMESLDPDYYKSLVWILENDITDIIEETFSVETDD 3074
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: PUB3_SCHPO (E3 ubiquitin-protein ligase pub3 OS=Schizosaccharomyces pombe GN=pub3 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.041e-38 Identity = 85/210 (40.48%), Postives = 128/210 (60.95%), Query Frame = 2 Query: 53 DFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEHR 679 DF K YFRS Q + L G + VRR ++ EDSY ++ S DLK RL + F GE+G+D GGL+RE++ LLS +FD LF + +N + Q NP+S EHL+YF+F+GRV+ A+F + LD F S YK +L KV+ D+E++D ++Y++LKW+LEND++ I DLTFS++ D + + + + EE++ Sbjct: 411 DFRRKLIYFRS---QPGMRPLPGQCNVKVRRDHIFEDSYAEIMRYSAHDLKKRLMIRFDGEDGLDYGGLSREFFFLLSHKMFDPIYCLFEYSAVDNYTLQINPHSSINPEHLNYFRFIGRVIGLAIFHRRFLDAFFVVSLYKKLLRKKVSLADMESIDAEFYRSLKWVLENDITGILDLTFSVEEDHFGEVRTVELITNGENIEVTEENK 617
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: PUB1_SCHPO (E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe GN=pub1 PE=1 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.272e-36 Identity = 81/184 (44.02%), Postives = 117/184 (63.59%), Query Frame = 2 Query: 53 DFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVG-NNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMD 601 DF K YF S Q L G I VRR ++ EDSY ++ +S DLK RL + F GE+G+D GGL+RE++ LLS +F+ LF +N + Q NP+S EHL+YFKF+GRV+ A+F + +D F SFYK +L KVT D+E++D +YY++L W+L+ND++ + DLTFS++ Sbjct: 392 DFRRKLIYFLS---QPALHPLPGQCHIKVRRNHIFEDSYAEIMRQSATDLKKRLMIKFDGEDGLDYGGLSREYFFLLSHEMFNPFYCLFEYSSVDNYTLQINPHSGINPEHLNYFKFIGRVIGLAIFHRRFVDAFFVVSFYKMILQKKVTLQDMESMDAEYYRSLVWILDNDITGVLDLTFSVE 572 The following BLAST results are available for this feature:
BLAST of CX295831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295831 ID=CX295831; Name=CX295831; organism=Citrus clementina; type=EST; length=738bpback to top |