CX295831
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: HECW1_HUMAN (E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 67/192 (34.90%), Postives = 117/192 (60.94%), Query Frame = 2 Query: 38 APRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDL-KGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNA-SFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDAD 607 +P DF+ K F K+ + G +++ +RR ++LE ++NQ+ S ++L + +L V F GEEG+D G +RE++ LLS+ +F+ LF N+ + Q +P S + HL +F+F GR++ AL LLD FTR FYK +L + D+E +D +++++L+WM +N+++DI DLTF+++ + Sbjct: 1221 SPYRRDFEAKLRNFYRKLEAKGFGQGPGKIKLIIRRDHLLEGTFNQVMAYSRKELQRNKLYVTFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQISPMSAFVENHLEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSLQWMKDNNITDILDLTFTVNEE 1412
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: HECW1_MOUSE (E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.036e-26 Identity = 65/192 (33.85%), Postives = 117/192 (60.94%), Query Frame = 2 Query: 38 APRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDL-KGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNA-SFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMDAD 607 +P DF+ K F K+ + G +++ +RR ++LE ++NQ+ S ++L + +L + F GEEG+D G +RE++ LLS+ +F+ LF N+ + Q +P S + +L +F+F GR++ AL LLD FTR FYK +L + D+E +D +++++L+WM +N+++DI DLTF+++ + Sbjct: 1219 SPYRRDFEAKLRNFYRKLEAKGFGQGPGKVKLIIRRDHLLEGTFNQVMAYSRKELQRNKLYITFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQISPMSAFVENYLEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLKLPCDLSDLEYLDEEFHQSLQWMKDNNITDILDLTFTVNEE 1410
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.924e-26 Identity = 61/160 (38.12%), Postives = 96/160 (60.00%), Query Frame = 2 Query: 125 LRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT-TVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWMLENDVSDIPDLTFSMD 601 L++ V RA ED+Y+ + S D+K +L + F+ E+G+D GG++RE++ +LS IF+ G LF +N Q +P S + SYF+FVGRV+ A++ + LDV F FYK +L + D++ VD YY++LKW+ NDV + L FS++ Sbjct: 317 LQLKVSRATTFEDAYDIISKLSVSDMKKKLLIRFRNEDGLDYGGVSREFFYILSHAIFNPGYSLFEYATDDNYGLQISPLSSVNPDFRSYFRFVGRVMGLAIYHRRYLDVQFVLPFYKRILQKPLCLEDVKDVDEVYYESLKWIKNNDVDESLCLNFSVE 476
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: K0317_MOUSE (Protein KIAA0317 OS=Mus musculus GN=Kiaa0317 PE=2 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 3.974e-22 Identity = 67/198 (33.84%), Postives = 106/198 (53.54%), Query Frame = 2 Query: 56 FDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFT--TVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDG-------QLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKN-LKWMLENDVSDIPDLTFSMDADEEKH 619 F +K +F+ ++RQ H + + + V R +LE S R S D V FQ EE +D GG REW++L+ + +FD + LF T N A PNPN L ++F GR+V K L++ QL+ FTRSF ++G+++ Y E DP++YK+ + ++L ND+S++ +L F+ EEK+ Sbjct: 439 FQDKVNFFQRELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTTSQLFARFTDSNQALVHPNPNRPAHL-RLKMYEFAGRLVGKCLYESSLGGAYKQLVRARFTRSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEM-ELVFA----EEKY 630
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: K0317_HUMAN (Protein KIAA0317 OS=Homo sapiens GN=KIAA0317 PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 5.190e-22 Identity = 67/198 (33.84%), Postives = 106/198 (53.54%), Query Frame = 2 Query: 56 FDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNN--ASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDG-------QLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKN-LKWMLENDVSDIPDLTFSMDADEEKH 619 F +K +F+ ++RQ H + + + V R +LE S R S D V FQ EE +D GG REW++L+ + +FD LFT +N A PNPN L ++F GR+V K L++ QL+ FTRSF ++G+++ Y E DP++YK+ + ++L ND+S++ +L F+ EEK+ Sbjct: 439 FQDKVNFFQRELRQVHMKRPHSKVTLKVSRHALLESSLKATRNFSISDWSKNFEVVFQDEEALDWGGPRREWFELICKALFDTTNQLFTRFSDNNQALVHPNPNRPAHL-RLKMYEFAGRLVGKCLYESSLGGAYKQLVRARFTRSFLAQIIGLRMHYKYFETDDPEFYKSKVCFILNNDMSEM-ELVFA----EEKY 630
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: UPL6_ARATH (E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana GN=UPL6 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.278e-20 Identity = 62/193 (32.12%), Postives = 110/193 (56.99%), Query Frame = 2 Query: 38 APRLIDFDNKRAYFRSKIRQQHEQHLSGPL----RISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGE-----EGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNS-VYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTY-HDIEAVDPDYYKNLKWM--LENDVSDI 577 AP LI F ++ F +++ + H S + R +RR ++LED+YNQ+ S DL+ + V F E GID GG+ +++ + ++R FD LF ++ + PNP S + +HL +F F+G ++AKA+F+G L+D+ F +F+ L K Y +D+ ++DP+ Y++L ++ + D+SD+ Sbjct: 634 APFLIPFTSRVKIFTTQLATARQSHGSQGIFARNRFRIRRDHILEDAYNQMSALSEDDLRSSIRVTFVNELGVEEAGIDGGGIFKDFMEKITRAAFDVQYGLFKETADHMLY-PNPGSGMIHEQHLQFFHFLGSLLAKAMFEGILVDIPFA-TFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKRYKGDISDL 824
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: MUG30_SCHPO (Probable E3 ubiquitin-protein ligase mug30 OS=Schizosaccharomyces pombe GN=mug30 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.848e-20 Identity = 66/216 (30.56%), Postives = 117/216 (54.17%), Query Frame = 2 Query: 38 APRLIDFDNKRAYFRSKIRQQHEQHLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLGVKVTYHDIEAVDPDYYKNLKWML--ENDVSDIPDLTFSMDADEEKHILYEKTEVTDYELNLEEEHR 679 A R ++ + A+F S + + + + L I VRR +LEDS Q+ R+ +D + L V F GEEGIDAGGL REW LL+R +F LF ++++ N ++++ + Y+ G ++ A+ + LDV R+FYK +L + ++++D++ P Y+ LK +L E DV + L F+++ + + + EL+++ E+R Sbjct: 407 ARRKMEIKAREAFFSSILSKMNVEPY---LMIRVRRDRLLEDSLRQINDRN-KDFRKALKVEFLGEEGIDAGGLKREWLLLLTRKVFSPEFGLFVNCEESSNYLWF-NYSHRSKEIDYYHMSGILMGIAIHNSINLDVQMPRAFYKKLLQLPLSFNDLDDFQPSLYRGLKELLLFEGDVKNTYGLNFTINLKAVEGFRTVELKEGGSELSVDNENR 617
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: UBE3B_XENTR (Ubiquitin-protein ligase E3B OS=Xenopus tropicalis GN=ube3b PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.719e-20 Identity = 63/209 (30.14%), Postives = 110/209 (52.63%), Query Frame = 2 Query: 41 PRLIDFDNKRAYFRSKIRQQHEQ------HLSGP--LRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLG--VKVTYHDIE---AVDPDYYKNLKWMLENDVSDIPDLTFSMDADEE 613 P +I N+ FR+ + ++ E+ + + P I++RR+ +LED Y+QLR S +KG + V F E GID G+ +E+ + + + +FD LF T + P+P S +L F+FVG+++ KA+++G ++DV F F +LG + Y ++ ++D ++YKNL + D DI DL ++ DE+ Sbjct: 649 PHVIPHKNRVLLFRNIVTKEKEKLGLVETNTASPHVTHITIRRSRMLEDGYDQLRQLSQNAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSSGDRLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSIFYSSVDELPSLDSEFYKNLTSIKRYD-GDISDLGLTLSYDED 856
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: UBE3B_MOUSE (Ubiquitin-protein ligase E3B OS=Mus musculus GN=Ube3b PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 3.719e-20 Identity = 64/212 (30.19%), Postives = 109/212 (51.42%), Query Frame = 2 Query: 41 PRLIDFDNKRAYFRSKIRQQHEQ-----------HLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLG--VKVTYHDIE---AVDPDYYKNLKWMLENDVSDIPDLTFSMDADEE 613 P ++ N+ FR+ + ++ E+ H++ I++RR+ +LED Y QLR S +KG + V F E GID G+ +E+ + + + +FD LF T + P+P S +L F+FVG+++ KA+++G ++DV F F MLG V Y ++ ++D ++YKNL + D DI DL ++ DE+ Sbjct: 647 PHVVPHKNRVLLFRNMVIKEKEKLGLVETSSASPHVT---HITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQMLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYD-GDIADLGLTLSYDED 854
BLAST of CX295831 vs. ExPASy Swiss-Prot
Match: UBE3B_HUMAN (Ubiquitin-protein ligase E3B OS=Homo sapiens GN=UBE3B PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 3.719e-20 Identity = 64/212 (30.19%), Postives = 109/212 (51.42%), Query Frame = 2 Query: 41 PRLIDFDNKRAYFRSKIRQQHEQ-----------HLSGPLRISVRRAYVLEDSYNQLRMRSTQDLKGRLNVHFQG-----EEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNNASFQPNPNSVYQTEHLSYFKFVGRVVAKALFDGQLLDVHFTRSFYKHMLG--VKVTYHDIE---AVDPDYYKNLKWMLENDVSDIPDLTFSMDADEE 613 P +I N+ FR+ + ++ E+ H++ I++RR+ +LED Y QLR S +KG + V F E GID G+ +E+ + + + +FD LF T + P+P S +L F+FVG+++ KA+++G ++DV F F +LG V Y ++ ++D ++YKNL + D DI DL ++ DE+ Sbjct: 645 PHVIPHKNRVLLFRTMVTKEKEKLGLVETSSASPHVT---HITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYD-GDITDLGLTLSYDED 852 The following BLAST results are available for this feature:
BLAST of CX295831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295831 ID=CX295831; Name=CX295831; organism=Citrus clementina; type=EST; length=738bpback to top |