CX296370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_SYNSC (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9605) GN=ispH PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.114e-44 Identity = 83/147 (56.46%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D F+ +L S+ YNRRGFG EE E + Q Y S +I +++NG+ G + V+LAE++GFCWGVERAV +AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPAFGA V+EM LN R Sbjct: 2 DTHAFKRSLHHSERYNRRGFGRAEEVAESLEQAYQSGLIGTIRDNGYRLEHGRLNVRLAEAFGFCWGVERAVAMAYETRKHYPSERLWITNEIIHNPSVNDHLREMDVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNER 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP8 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 8801) GN=ispH PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.938e-44 Identity = 77/147 (52.38%), Postives = 113/147 (76.87%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D K F+ +L +S+NY+R+GFG E + +MN EY S +I+++++N +++ GNV + LA+++GFCWGVERAV +AYE R+ FP+E IWITNE+IH+P+VN+RLE+M ++ I V G+K F + GDVV+LPAFGA+V EM LN+R Sbjct: 2 DTKAFKRSLQQSENYHRKGFGQTEAAMGVMNTEYQSSLIQQIRQNNYQWKQGNVTIHLAQAFGFCWGVERAVAMAYETRQHFPKESIWITNELIHHPSVNQRLEQMEIKFIEVINGQKDFSQIKSGDVVILPAFGASVSEMQLLNDR 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.938e-44 Identity = 79/147 (53.74%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D K F+ L S+NYNR+GFGH+ E + EY S +I+++++ + G+V ++LA+++GFCWGVERAV +AYE RK FP E+IWITNEIIHNP+VN+R++EM V IPVE G K F VV DVV+LPAFGA+V+EM L+ + Sbjct: 2 DTKTFKRTLQHSENYNRKGFGHQAEVATQLQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.938e-44 Identity = 79/147 (53.74%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D K F+ L S+NYNR+GFGH+ E + EY S +I+++++ + G+V ++LA+++GFCWGVERAV +AYE RK FP E+IWITNEIIHNP+VN+R++EM V IPVE G K F VV DVV+LPAFGA+V+EM L+ + Sbjct: 2 DTKTFKRTLQHSENYNRKGFGHQAEVATQLQSEYQSSLIQEIRDRNYTLQRGDVTIRLAQAFGFCWGVERAVAMAYETRKHFPTERIWITNEIIHNPSVNQRMQEMQVGFIPVEAGNKDFSVVGNNDVVILPAFGASVQEMQLLSEK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9902) GN=ispH PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.062e-44 Identity = 83/147 (56.46%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D F+ +L S+ YNRRGFG EE E + Q Y S +I +++NG++ T G + V LAE++GFCWGVERAV +AYE R+ +P E++WITNEIIHNP+VN L EM V IPVEEG K F V GDVV+LPAFGA V+EM LN R Sbjct: 2 DTHAFKRSLHHSERYNRRGFGRAEEVAENLEQAYQSGLIGTIRDNGYKLTHGRLNVHLAEAFGFCWGVERAVAMAYETRRHYPSERLWITNEIIHNPSVNDHLREMDVLFIPVEEGVKDFSGVTSGDVVILPAFGATVQEMQLLNER 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_SYNPW (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain WH7803) GN=ispH PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 9.062e-44 Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D F+ +L SD YNRRGFG EE + Q Y S +I +++NG+ G ++V+LA+ +GFCWGVERAV +AYE RK +P E++WITNEIIHNP+VN L EM VQ IPVE+G K F V GDVV+LPAFGA V+EM LN R Sbjct: 2 DTHAFKRSLHHSDRYNRRGFGRAEEVAGSLEQAYQSSLIGSIRDNGYRLNHGRLQVRLAKDFGFCWGVERAVAMAYETRKHYPSERLWITNEIIHNPSVNDHLREMNVQFIPVEQGVKDFSGVTSGDVVILPAFGATVQEMQLLNER 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.546e-43 Identity = 82/148 (55.41%), Postives = 113/148 (76.35%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPV-EEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D K F+ +L S+ Y+R+GFGH+ E E++ EY S +I++++ENG + G V ++LAE++GFCWGVERAV +AYE R+ FP E+IWITNEIIHNP+VN+ L EM V+ IPV E+G+K F VV DVV+LPAFGA+V+EM LN++ Sbjct: 2 DTKAFKRSLHSSNQYHRKGFGHEAEVTEMLRFEYQSSLIQQIRENGNRFQRGEVTIQLAEAFGFCWGVERAVALAYETRQHFPTERIWITNEIIHNPSVNQNLREMQVEFIPVDEQGQKDFSVVAGEDVVILPAFGASVQEMQLLNDK 149
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.497e-43 Identity = 77/147 (52.38%), Postives = 111/147 (75.51%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D K F+ +L S+NYNR+GFGH+ E + EY S++I+++++ + G+V ++LA+++GFCWGVERAV +AYE R+ FP E IWITNEIIHNP+VN+R++EM V+ IP+E K F VV GDVV+LPAFGA+V+EM L+++ Sbjct: 2 DTKAFKRSLQHSENYNRKGFGHQAEVATQLQSEYQSNLIQEIRDRNYILQRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPTEHIWITNEIIHNPSVNQRMQEMEVEFIPIEGKNKDFSVVGTGDVVILPAFGASVQEMQILHDK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_SYNS3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain CC9311) GN=ispH PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.308e-42 Identity = 82/147 (55.78%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D F+ +L SD YNRRGFG +E + Q Y S +I +++NG+ T G +KV+LAE++GFCWGVERAV +AYE R+ +P+E+IWITNEIIHNP+VN L EM V I VE G K F V GDVV+LPAFGA V+EM LN R Sbjct: 2 DTHAFKRSLHHSDRYNRRGFGRADEVAGSLEQAYQSSLIGSIRDNGYSLTHGRLKVRLAEAFGFCWGVERAVAMAYETRRHYPQERIWITNEIIHNPSVNDHLREMDVLFISVEGGVKDFSGVATGDVVILPAFGATVQEMQLLNER 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROMS (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=ispH PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.889e-41 Identity = 76/147 (51.70%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ + Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEK 148 The following BLAST results are available for this feature:
BLAST of CX296370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296370 ID=CX296370; Name=CX296370; organism=Citrus clementina; type=EST; length=671bpback to top |