CX296370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROM0 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=ispH PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.889e-41 Identity = 76/147 (51.70%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF YT G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ + Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYTKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROMM (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispH PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.377e-41 Identity = 78/147 (53.06%), Postives = 102/147 (69.39%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + F+ +L S+ YNRRGFG E + + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWITNEIIHNP+VN+ L EM V I E G K F VN GDVV+LPAFGA V+EM L+ R Sbjct: 2 DTQAFKRSLHHSERYNRRGFGRANEVASNLEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVNDGDVVILPAFGATVQEMELLHER 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROM9 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=ispH PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.377e-41 Identity = 75/147 (51.02%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + FR +L SD YNRRGF + + + + Y SD+I +++NGF Y G + +KLA+++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ + Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLISSIRDNGFTYNKGRLNIKLAKAFGFCWGVERAVAMAYETRRHYPNENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSNGDVVILPAFGATVQEMKLLHEK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_TRIEI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=ispH PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.089e-40 Identity = 72/147 (48.98%), Postives = 108/147 (73.47%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D K F L +S+NYNR+GFGH +E LM Y S++I++++EN + G V +KLA+++GFCWGVER+V +AYE R+ FP ++IWI+ E+IHNP+VN+ +++M ++ IPV +G+K F V DVV+LPAFGA+V+EM L ++ Sbjct: 2 DTKAFTRALKKSENYNRQGFGHAQEVATLMQSAYKSNLIQQIRENNYTLQRGEVTIKLAKTFGFCWGVERSVAMAYETRQHFPNQQIWISYELIHNPSVNQDMKDMEIKFIPVIDGQKDFSVAGNNDVVILPAFGASVQEMQILKDK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROM3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=ispH PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 3.563e-40 Identity = 77/147 (52.38%), Postives = 102/147 (69.39%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + F+ +L S+ YNRRGFG E + + Y S +I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E+IWITNEIIHNP+VN+ L EM V I E G K F V+ GDVV+LPAFGA V+EM L+ R Sbjct: 2 DTQAFKRSLHHSERYNRRGFGRANEVASNLEKAYQSSLIGSIRDNGYVLQHGRLQVKLAEAFGFCWGVERAVAMAYETRRHYPSERIWITNEIIHNPSVNEHLREMDVLFIHAEGGVKDFSCVSDGDVVILPAFGATVQEMELLHER 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROMT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=ispH PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.654e-40 Identity = 78/147 (53.06%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + F+ L +SD YNRRGFG + + + + Y S +I ++ENG G +KVKLAE++GFCWGVER+V +AYE RK +P E+IWITNEIIHNP+VN L +M V I E+G K F VV GDVV+LPAFGA V++M L++R Sbjct: 2 DTQAFKQTLHKSDRYNRRGFGSANKRAQALAEAYQSGLIGSIRENGNLLEHGRLKVKLAEAFGFCWGVERSVAMAYETRKHYPNERIWITNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPAFGATVQDMKLLHDR 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=ispH PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.654e-40 Identity = 78/147 (53.06%), Postives = 103/147 (70.07%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + F+ L +SD YNRRGFG + + + + Y S +I ++ENG G +KVKLAE++GFCWGVER+V +AYE RK +P E+IWITNEIIHNP+VN L +M V I E+G K F VV GDVV+LPAFGA V++M L++R Sbjct: 2 DTQAFKQTLHKSDRYNRRGFGSANKRAQALAEAYQSGLIGSIRENGNLLEHGRLKVKLAEAFGFCWGVERSVAMAYETRKHYPNERIWITNEIIHNPSVNDHLRKMNVLFISEEKGVKDFSVVKDGDVVILPAFGATVQDMKLLHDR 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROMP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispH PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.938e-40 Identity = 74/147 (50.34%), Postives = 102/147 (69.39%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + FR +L SD YNRRGF + + + + Y SD+I ++ N F Y G + +KLA+++GFCWGVERAV +AYE R+ +P+E IWITNEIIHNP+VN L +M V+ I + G K F +V+ GDVV+LPAFGA V+EM L+ + Sbjct: 2 DTQAFRRSLHHSDRYNRRGFDSPTKRAQALEEAYQSDLITSIRNNSFTYKKGRLNIKLAQAFGFCWGVERAVAMAYETRRHYPDENIWITNEIIHNPSVNDHLRKMNVKFISAKNGIKDFSLVSDGDVVILPAFGATVQEMKLLHEK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROM4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=ispH PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.037e-39 Identity = 75/147 (51.02%), Postives = 104/147 (70.75%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ + G ++VKLAE++GFCWGVERAV +AYE R+ +P+E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V+EM L+ R Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPTKRAQALEKAYQSNLIGSIRDNGYLFEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPKESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKNFSSVQEGDVVILPAFGATVQEMKLLHER 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROMA (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus GN=ispH PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 6.720e-39 Identity = 75/147 (51.02%), Postives = 101/147 (68.71%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + F+ +L SD YNRRGF + + + + Y S++I +++NG+ G ++VKLAE++GFCWGVERAV +AYE R+ +P E IWITNEIIHNP+VN L M V+ I E+G K F V +GDVV+LPAFGA V EM L+ R Sbjct: 2 DTQAFKRSLHHSDRYNRRGFESPAKRAQALEKAYQSNLIASIRDNGYLLEHGRLRVKLAEAFGFCWGVERAVAMAYETRRHYPTESIWITNEIIHNPSVNDHLRNMNVRFISAEKGIKDFSSVEEGDVVILPAFGATVHEMKLLHER 148 The following BLAST results are available for this feature:
BLAST of CX296370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296370 ID=CX296370; Name=CX296370; organism=Citrus clementina; type=EST; length=671bpback to top |