CX296370
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_PROM5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=ispH PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.554e-38 Identity = 71/147 (48.30%), Postives = 100/147 (68.03%), Query Frame = 2 Query: 218 DAKLFRHNLTRSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 D + +H++ S YNR+GF + + + + Y SD+I ++EN F + G +K+KLA+S+GFCWGVERAV +AYE R+ +P E IW+TNEIIHNP+VN L M V+ I + G K F V+ GDVV+LPAFGA V+EM L+ + Sbjct: 2 DTQAIKHSVQHSGRYNRKGFESPTQRAKALGESYQSDLIASIRENNFSFEKGRLKIKLAKSFGFCWGVERAVAMAYETRRHYPNEDIWMTNEIIHNPSVNNHLSRMNVKIISAKNGIKDFSSVSTGDVVILPAFGATVQEMQLLHEK 148
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_SYNY3 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=ispH PE=3 SV=2) HSP 1 Score: 149.058 bits (375), Expect = 2.023e-35 Identity = 69/119 (57.98%), Postives = 92/119 (77.31%), Query Frame = 2 Query: 302 LMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEGKKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 +MN EY S +I+++++N + G+V + LAE++GFCWGVERAV +AYE R+ FP +++WITNEIIHNP+VN+RL EM V I V G+K F V KGDVV+LPAFGA+VEEM LN+R Sbjct: 3 VMNTEYQSHLIQEIRQNNYRLERGDVTILLAEAFGFCWGVERAVAMAYETRQHFPGDRLWITNEIIHNPSVNQRLREMEVNFIDVVNGEKDFSGVAKGDVVILPAFGASVEEMQLLNDR 121
BLAST of CX296370 vs. ExPASy Swiss-Prot
Match: ISPH_GLOVI (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Gloeobacter violaceus GN=ispH PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.149e-30 Identity = 63/141 (44.68%), Postives = 94/141 (66.67%), Query Frame = 2 Query: 248 RSDNYNRRGFGHKEETLELMNQEYTSDIIKKLKENGFEYTWGNVKVKLAESYGFCWGVERAVQIAYEARKQFPEEKIWITNEIIHNPTVNKRLEEMAVQNIPVEEG----KKQFDVVNKGDVVVLPAFGAAVEEMVTLNNR 658 +S NY R+GFG K E + + EY S +I +++ NG+ G V V+LAE++GFCWGV++AV +AYE + F ++WITNEIIHNP VN+ L M ++ + +E K F+ V++ DVV+LPAFGA+ +EM L+ + Sbjct: 2 QSKNYFRKGFGLKAEVQDDLKAEYESSLIHEIRANGYTLRRGGVTVRLAEAFGFCWGVDKAVSMAYETHRMFAGRQLWITNEIIHNPLVNQHLRAMGIRFLDEDESGRRVPKDFERVSEKDVVILPAFGASTQEMQILDEK 142 The following BLAST results are available for this feature:
BLAST of CX296370 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296370 ID=CX296370; Name=CX296370; organism=Citrus clementina; type=EST; length=671bpback to top |