CX296410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK122_ARATH (50S ribosomal protein L12-2, chloroplastic OS=Arabidopsis thaliana GN=RPL12B PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 7.541e-21 Identity = 49/71 (69.01%), Postives = 62/71 (87.32%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSVV 268 +T FDVVI++VP RIAVI A+RA+T+L+L E+K+LIEG PKKFKEGV+KD+AE+ K QLEEAGAKVS+V Sbjct: 123 QTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDKTQLEEAGAKVSIV 193
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_CYAP7 (50S ribosomal protein L7/L12 OS=Cyanothece sp. (strain PCC 7424) GN=rplL PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.194e-20 Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV+++EVP++ +IA++K VR +T L LKEAKDL+E PK KEG +KDDAE+ KK+LEEAGAKV+V Sbjct: 61 KTEFDVILEEVPADKKIAILKVVRTITGLGLKEAKDLVESTPKPIKEGTNKDDAEETKKKLEEAGAKVTV 130
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_CYAA5 (50S ribosomal protein L7/L12 OS=Cyanothece sp. (strain ATCC 51142) GN=rplL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.742e-20 Identity = 45/70 (64.29%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV+++EVP + +IA++K VR +T L LKEAKD++E PK KEG K+DAED KK+LEEAGAKVSV Sbjct: 63 KTEFDVILEEVPGDKKIAILKVVRGITGLGLKEAKDMVESTPKPIKEGTGKEDAEDIKKKLEEAGAKVSV 132
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ACAM1 (50S ribosomal protein L7/L12 OS=Acaryochloris marina (strain MBIC 11017) GN=rplL PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.888e-20 Identity = 46/70 (65.71%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV++EVPS+ +IAV+K VR LT L LKEAK+++E PK KEGVSK+DAE+AKK LE+AG K S+ Sbjct: 59 KTEFDVVLEEVPSDKKIAVLKVVRTLTGLGLKEAKEMVESTPKSIKEGVSKEDAEEAKKSLEDAGGKASL 128
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_CYAP8 (50S ribosomal protein L7/L12 OS=Cyanothece sp. (strain PCC 8801) GN=rplL PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.384e-20 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+++VP++ +IA++K VRA+T L LKEAKDL+E PK KE +KDDAE KKQLEEAGAK SV Sbjct: 62 KTEFDVVLEDVPADKKIAILKVVRAITGLGLKEAKDLVESAPKPIKEATNKDDAESIKKQLEEAGAKASV 131
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_PORPU (50S ribosomal protein L12, chloroplastic OS=Porphyra purpurea GN=rpl12 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.089e-19 Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV++EVP+ +IAV+K VR+LT L LKEAKDL+E PK KEG SKDDAE KKQLE+AGA V V Sbjct: 59 KTEFDVVLEEVPAPKKIAVLKVVRSLTGLGLKEAKDLVESAPKTLKEGASKDDAEAMKKQLEDAGATVGV 128
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_THEEB (50S ribosomal protein L7/L12 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplL PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 1.857e-19 Identity = 45/70 (64.29%), Postives = 59/70 (84.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KT FDV+++EVP++ +IAV+K VR+LT L LKEAK+++E PK KEG SK+DAE AKK+LEEAGAKVS+ Sbjct: 62 KTAFDVILEEVPADKKIAVLKVVRSLTGLGLKEAKEVVESTPKPVKEGASKEDAEAAKKELEEAGAKVSI 131
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_CYAP4 (50S ribosomal protein L7/L12 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplL PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19 Identity = 45/70 (64.29%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KT FDVV+D+VP++ +IAV+K VR LT L LKEAK+++E PK KEG+SK+DAE AKKQLE+AG KVS+ Sbjct: 61 KTAFDVVLDDVPADKKIAVLKIVRELTGLGLKEAKEVVESTPKPIKEGISKEDAEAAKKQLEDAGGKVSI 130
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_ODOSI (50S ribosomal protein L12, chloroplastic OS=Odontella sinensis GN=rpl12 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19 Identity = 44/70 (62.86%), Postives = 60/70 (85.71%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV++DEVP++ +IAV+K VR+LT L LKEAK+L+E PK+ +EGV+KD AE+AKKQ+E+AG K S+ Sbjct: 57 KTEFDVMLDEVPADKKIAVLKVVRSLTGLGLKEAKELVESAPKQIQEGVAKDAAEEAKKQIEDAGGKASL 126
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_CHAVU (50S ribosomal protein L12, chloroplastic OS=Chara vulgaris GN=rpl12 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.426e-19 Identity = 43/70 (61.43%), Postives = 59/70 (84.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFD++++EVPS++RI VIK +R++TN LKEAK+ IE LPK KEG+SK++AE K QLEE+GAKV++ Sbjct: 65 KTEFDIILEEVPSSSRITVIKVIRSITNSGLKEAKEFIEALPKTVKEGISKEEAESVKAQLEESGAKVTL 134 The following BLAST results are available for this feature:
BLAST of CX296410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296410 ID=CX296410; Name=CX296410; organism=Citrus clementina; type=EST; length=559bpback to top |