CX296410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_NOSP7 (50S ribosomal protein L7/L12 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplL PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.058e-19 Identity = 43/70 (61.43%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF+V++D VP++ +IAV+K VR LT L LKEAKDL+E PK KEG++KD AEDAKK++EEAG KV++ Sbjct: 60 QTEFEVILDSVPADKKIAVLKIVRELTGLGLKEAKDLVEAAPKAVKEGIAKDAAEDAKKRIEEAGGKVTI 129
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_PORYE (50S ribosomal protein L12, chloroplastic OS=Porphyra yezoensis GN=rpl12 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.058e-19 Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV++EVP+ +I+V+K VR LT L LKEAKDL+E PK KEG SKDDAE KKQLE+AGA V V Sbjct: 59 KTEFDVVLEEVPAPKKISVLKVVRPLTGLGLKEAKDLVESTPKVLKEGASKDDAETMKKQLEDAGATVIV 128
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_GUITH (50S ribosomal protein L12, chloroplastic OS=Guillardia theta GN=rpl12 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.218e-19 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFD+++++VP++ +IAV+K VR LT L LKEAKDL+E PK KEG+SK DAE KKQLEEAGAK ++ Sbjct: 59 KTEFDLILEDVPADKKIAVLKVVRGLTGLGLKEAKDLVEAAPKPIKEGMSKADAEAGKKQLEEAGAKATL 128
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_THAPS (50S ribosomal protein L12, chloroplastic OS=Thalassiosira pseudonana GN=rpl12 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.572e-18 Identity = 44/70 (62.86%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEF V++DEVP++ +IAV+K VR LT L LKEAK+L+E PK +EG+ KD AEDAKKQ+E+AG KVS+ Sbjct: 58 KTEFTVMLDEVPADKKIAVLKVVRTLTGLGLKEAKELVESTPKMVQEGLGKDAAEDAKKQIEDAGGKVSL 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_NEPOL (50S ribosomal protein L12, chloroplastic OS=Nephroselmis olivacea GN=rpl12 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.572e-18 Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF V+I++VPS RIAVIK VRALT L LKEAKD+IE +PK KEG+ KD+A+ K+QLEEAGA V+V Sbjct: 58 QTEFTVMINDVPSAKRIAVIKVVRALTGLGLKEAKDMIESVPKAIKEGIGKDEAQQIKQQLEEAGATVTV 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_SYNP2 (50S ribosomal protein L7/L12 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplL PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.054e-18 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV++DEVP++ +IAV+K VR +T L LKEAK+++E PK KE K+DAE KKQLE+AGAK SV Sbjct: 58 KTEFDVILDEVPADKKIAVLKVVRGITGLGLKEAKEMVESAPKPIKEATGKEDAEAIKKQLEDAGAKASV 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_TRIEI (50S ribosomal protein L7/L12 OS=Trichodesmium erythraeum (strain IMS101) GN=rplL PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.682e-18 Identity = 41/70 (58.57%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFD ++ E PS+ +IA++K VR++T L LKEAK+L+E +PK KEG++K+ AED KKQLEEAGAKV + Sbjct: 63 QTEFDAILTEFPSDKKIAILKVVRSITGLGLKEAKELVESVPKPLKEGIAKEAAEDIKKQLEEAGAKVEI 132
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ANASP (50S ribosomal protein L7/L12 OS=Anabaena sp. (strain PCC 7120) GN=rplL PE=3 SV=3) HSP 1 Score: 91.2781 bits (225), Expect = 3.503e-18 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDVV++ VP++ +IAV+K VR +T L LKEAKDL+E PK KE ++KD AEDAKK++EEAG KV+V Sbjct: 60 QTEFDVVLESVPADKKIAVLKIVREITGLGLKEAKDLVEAAPKAVKEAIAKDAAEDAKKRIEEAGGKVTV 129
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_SYNY3 (50S ribosomal protein L7/L12 OS=Synechocystis sp. (strain PCC 6803) GN=rplL PE=1 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18 Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV+++EVP++ +IAV+K VR +T L LKEAK+L+E PK KE KDDAE KKQ+EEAG K +V Sbjct: 58 KTEFDVILEEVPADKKIAVLKVVRTITGLGLKEAKELVESTPKAIKEATGKDDAEAIKKQIEEAGGKAAV 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ANAVT (50S ribosomal protein L7/L12 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplL PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 5.975e-18 Identity = 41/70 (58.57%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDV+++ VP++ +IAV+K VR +T L LKEAKDL+E PK KE ++KD AEDAKK++EEAG KV++ Sbjct: 58 QTEFDVILESVPADKKIAVLKIVREITGLGLKEAKDLVEAAPKAVKEAIAKDAAEDAKKRIEEAGGKVTI 127 The following BLAST results are available for this feature:
BLAST of CX296410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296410 ID=CX296410; Name=CX296410; organism=Citrus clementina; type=EST; length=559bpback to top |