CX296410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_LAWIP (50S ribosomal protein L7/L12 OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=rplL PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.019e-17 Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV++ E +N +IAVIK VRALT L LKEAKD ++G P KEGVSK+DAE+AKKQL EAGA V V Sbjct: 59 KTEFDVILKEAGAN-KIAVIKVVRALTGLGLKEAKDKVDGAPSTLKEGVSKEDAEEAKKQLTEAGATVEV 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_PHATR (50S ribosomal protein L12, chloroplastic OS=Phaeodactylum tricornutum GN=rpl12 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.331e-17 Identity = 41/70 (58.57%), Postives = 58/70 (82.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEF++++DEVP++ +IAV+K VR+LT L LKEAK+L+E PK+ +EG+ KD AE+AKKQ+E AG K S+ Sbjct: 58 KTEFNLMLDEVPADKKIAVLKVVRSLTGLGLKEAKELVESAPKQIQEGLGKDAAEEAKKQIEAAGGKASL 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_GLOVI (50S ribosomal protein L7/L12 OS=Gloeobacter violaceus GN=rplL PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.965e-17 Identity = 41/70 (58.57%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF V+++EVP++ +IA++K R +T L LKEAKDL+E PK KEGV+KDDA KK+LEEAGAK S+ Sbjct: 67 QTEFTVMLEEVPADKKIAILKVAREITGLGLKEAKDLVEAAPKAVKEGVNKDDAATIKKKLEEAGAKASI 136
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_NITOC (50S ribosomal protein L7/L12 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rplL PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 3.873e-17 Identity = 44/70 (62.86%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ SN ++ VIKAVR++T+L LKEAKDL+EG P KEG+SKD+A++ KKQLEEAGA + V Sbjct: 57 KTEFDVVLVSFGSN-KVQVIKAVRSITSLGLKEAKDLVEGAPSPVKEGISKDEADEIKKQLEEAGASIEV 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_RALME (50S ribosomal protein L7/L12 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rplL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.058e-17 Identity = 45/70 (64.29%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEF+V++ EV SN ++ VIKAVR +T L LKEAKDL++G PK KEGV K A+DAKK+LE+AGAKV V Sbjct: 55 KTEFNVILAEVGSN-KVGVIKAVREITGLGLKEAKDLVDGAPKPVKEGVDKATADDAKKKLEDAGAKVDV 123
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ERWCT (50S ribosomal protein L7/L12 OS=Erwinia carotovora subsp. atroseptica GN=rplL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.058e-17 Identity = 46/70 (65.71%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + +N ++AVIKAVR+ T L LKEAKDL+E P KEGVSKDDAE KK LEEAGA+V V Sbjct: 52 KTEFDVVLKAIGAN-KVAVIKAVRSATGLGLKEAKDLVESAPAVMKEGVSKDDAESLKKSLEEAGAEVEV 120
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BURVG (50S ribosomal protein L7/L12 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=rplL PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.058e-17 Identity = 47/70 (67.14%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEF VV+ E SN ++AVIKAVR LT L LKEAKD+++G PK KEGV K AE+AKK+LEEAGAKV V Sbjct: 54 KTEFTVVLTEAGSN-KVAVIKAVRELTGLGLKEAKDVVDGAPKAVKEGVDKAAAEEAKKKLEEAGAKVEV 122
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_EUGGR (50S ribosomal protein L12, chloroplastic OS=Euglena gracilis GN=rpl12 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.058e-17 Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV+I EVPS RI VIK VR+LT L LKEAKDLIE +PK E VSK+ AE+ KK LEEAGA + + Sbjct: 61 KTEFDVIIQEVPSAKRINVIKTVRSLTTLGLKEAKDLIESVPKVVCEAVSKEVAEETKKLLEEAGASIII 130
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_CHLVU (50S ribosomal protein L12, chloroplastic OS=Chlorella vulgaris GN=rpl12 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.058e-17 Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KT FDV+I++V S+ R+ V+K VR LT+L LKEAK+ I LPK ++GVSKDDAE +KKQLE+AGAKV + Sbjct: 61 KTTFDVIIEDVASDKRVPVLKVVRNLTSLDLKEAKEAITSLPKVIQQGVSKDDAEASKKQLEDAGAKVKI 130
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_GEOMG (50S ribosomal protein L7/L12 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=rplL PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFD+++ +N +I VIK VRALT L LKEAKDL++G PK K GVSK++AEDAKKQL E+GA+V + Sbjct: 58 KTEFDIILKSAGAN-KIGVIKVVRALTGLGLKEAKDLVDGAPKSVKTGVSKEEAEDAKKQLVESGAEVEI 126 The following BLAST results are available for this feature:
BLAST of CX296410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296410 ID=CX296410; Name=CX296410; organism=Citrus clementina; type=EST; length=559bpback to top |