CX296410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_GRATL (50S ribosomal protein L12, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl12 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.628e-17 Identity = 38/70 (54.29%), Postives = 57/70 (81.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFD++++EVP+ +IA++K VR++T L LKEAK L+E PK K+ +K+++E+ K+QLEEAGAKVS+ Sbjct: 61 KTEFDIILEEVPAAKKIAILKVVRSITGLGLKEAKALVESAPKMIKDNTNKENSEEIKQQLEEAGAKVSI 130
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_HYDS0 (50S ribosomal protein L7/L12 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=rplL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.127e-16 Identity = 43/70 (61.43%), Postives = 56/70 (80.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV++ + +N ++ VIK VR LT L LKEAKDL++G PK K+GVSK++AE+ KK+LEEAGAKV V Sbjct: 58 KTEFDVILQDAGAN-KLNVIKVVRELTGLGLKEAKDLVDGAPKPIKQGVSKEEAENIKKKLEEAGAKVEV 126
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BURCJ (50S ribosomal protein L7/L12 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=rplL PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.127e-16 Identity = 46/70 (65.71%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEF VV+ E +N +++VIKAVR LT L LKEAKDL++G PK KEGV K AE+AKK+LEEAGAKV V Sbjct: 55 KTEFTVVLAEAGAN-KVSVIKAVRELTGLGLKEAKDLVDGAPKPIKEGVDKAAAEEAKKKLEEAGAKVEV 123
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_SYNJB (50S ribosomal protein L7/L12 OS=Synechococcus sp. GN=rplL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 39/70 (55.71%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +T FDV+++ VP++ +IA++K VR LT L LK+AKDL+E PK KEGV+K++A D KK+LEEAGA V + Sbjct: 66 QTAFDVILEAVPADKKIAILKVVRELTGLGLKDAKDLVEAAPKPVKEGVAKEEANDIKKKLEEAGATVKI 135
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_SODGM (50S ribosomal protein L7/L12 OS=Sodalis glossinidius (strain morsitans) GN=rplL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 45/70 (64.29%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + +N ++AVIKAVR T L LKEAKDL+E P KEGVSKDDAE KK LE+AGA V V Sbjct: 53 KTEFDVVLSAIGAN-KVAVIKAVRGATGLGLKEAKDLVESAPATLKEGVSKDDAETLKKDLEQAGASVEV 121
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_PECCP (50S ribosomal protein L7/L12 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rplL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 46/70 (65.71%), Postives = 53/70 (75.71%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + +N ++AVIKAVR T L LKEAKDL+E P KEGVSKDDAE KK LEEAGA+V V Sbjct: 52 KTEFDVVLKGIGAN-KVAVIKAVRGATGLGLKEAKDLVESAPAVLKEGVSKDDAEALKKSLEEAGAEVEV 120
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_NEISI (50S ribosomal protein L7/L12 OS=Neisseria sicca GN=rplL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + ++ VIK VRA+T L LKEAKD+++G PK KEGVSK +AED +KQLEEAGAKV + Sbjct: 53 KTEFDVVLASA-GDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVSKAEAEDIQKQLEEAGAKVEI 121
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_NEIPE (50S ribosomal protein L7/L12 OS=Neisseria perflava GN=rplL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + ++ VIK VRA+T L LKEAKD+++G PK KEGVSK +AED +KQLEEAGAKV + Sbjct: 54 KTEFDVVLASA-GDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTLKEGVSKAEAEDIQKQLEEAGAKVEI 122
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_NEIMF (50S ribosomal protein L7/L12 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplL PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + ++ VIK VRA+T L LKEAKD+++G PK KEGVSK +AED +KQLEEAGAKV + Sbjct: 54 KTEFDVVLASA-GDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVSKAEAEDIQKQLEEAGAKVEI 122
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_NEIMB (50S ribosomal protein L7/L12 OS=Neisseria meningitidis serogroup B GN=rplL PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.472e-16 Identity = 43/70 (61.43%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + ++ VIK VRA+T L LKEAKD+++G PK KEGVSK +AED +KQLEEAGAKV + Sbjct: 54 KTEFDVVLASA-GDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVSKAEAEDIQKQLEEAGAKVEI 122 The following BLAST results are available for this feature:
BLAST of CX296410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296410 ID=CX296410; Name=CX296410; organism=Citrus clementina; type=EST; length=559bpback to top |