CX296410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_CHLP8 (50S ribosomal protein L7/L12 OS=Chlorobaculum parvum (strain NCIB 8327) GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ + +I VIK VRA+T L LKEAK++++G PK KE VSKD+AE K+L++AGA+V + Sbjct: 57 KTEFDVVLKAAGAQ-KINVIKVVRAITGLGLKEAKEMVDGAPKTVKEAVSKDEAEKIAKELKDAGAEVEL 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BACSK (50S ribosomal protein L7/L12 OS=Bacillus clausii (strain KSM-K16) GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDVV++ S+ +I VIK VR +T L LKEAK L++G P KEGV+K++AE+ K +LEEAGA V + Sbjct: 51 QTEFDVVLESAGSS-KIGVIKVVREITGLGLKEAKALVDGAPAPIKEGVAKEEAEEIKGKLEEAGASVEL 119
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ACIF5 (50S ribosomal protein L7/L12 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDV++ +N ++ IK VRA+T L LKEAKDL++G PK KEGV+K +AE K QL EAGA+ + Sbjct: 59 QTEFDVILTAAGAN-KVNTIKVVRAITGLGLKEAKDLVDGAPKPVKEGVAKAEAESVKAQLVEAGAEAEI 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ACIF2 (50S ribosomal protein L7/L12 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rplL PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13 Identity = 37/70 (52.86%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDV++ +N ++ IK VRA+T L LKEAKDL++G PK KEGV+K +AE K QL EAGA+ + Sbjct: 59 QTEFDVILTAAGAN-KVNTIKVVRAITGLGLKEAKDLVDGAPKPVKEGVAKAEAESVKAQLVEAGAEAEI 127
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_VIBCM (50S ribosomal protein L7/L12 OS=Vibrio cholerae serotype O1 (strain M66-2) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF+V++ +N ++AVIKAVR T L LKEAK L++G P KE VSK++AE KK+LEEAGA V V Sbjct: 52 QTEFNVILAAAGAN-KVAVIKAVRGATGLGLKEAKALVDGAPASVKEAVSKEEAEALKKELEEAGATVEV 120
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_VIBCH (50S ribosomal protein L7/L12 OS=Vibrio cholerae GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF+V++ +N ++AVIKAVR T L LKEAK L++G P KE VSK++AE KK+LEEAGA V V Sbjct: 52 QTEFNVILAAAGAN-KVAVIKAVRGATGLGLKEAKALVDGAPASVKEAVSKEEAEALKKELEEAGATVEV 120
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_VIBC3 (50S ribosomal protein L7/L12 OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF+V++ +N ++AVIKAVR T L LKEAK L++G P KE VSK++AE KK+LEEAGA V V Sbjct: 52 QTEFNVILAAAGAN-KVAVIKAVRGATGLGLKEAKALVDGAPASVKEAVSKEEAEALKKELEEAGATVEV 120
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_SHELP (50S ribosomal protein L7/L12 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV+ N ++AVIKA+R T L LKEAK + E P KEG+SK++AE KK+LEEAGA+V + Sbjct: 53 KTEFDVVMTSHGDN-KVAVIKALRGATGLGLKEAKGMAESAPVAVKEGISKEEAEALKKELEEAGAQVEI 121
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_GLUDA (50S ribosomal protein L7/L12 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF VV+ + + +I VIK +R +T L LKEAKDL+EG PK KEGV+KD+AE KK LE+ GA V V Sbjct: 56 QTEFTVVLAKA-GDKKINVIKEIRGITGLGLKEAKDLVEGAPKTVKEGVNKDEAEKIKKLLEDNGASVEV 124
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_FLAJ1 (50S ribosomal protein L7/L12 OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF VV+ + ++ ++AV+K V+ LT L LKEAKD+++G P KEGVSK++AE KK LEEAGA V + Sbjct: 54 QTEFTVVLKDAGAS-KLAVVKLVKELTGLGLKEAKDVVDGAPSNVKEGVSKEEAEGLKKSLEEAGATVEL 122 The following BLAST results are available for this feature:
BLAST of CX296410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296410 ID=CX296410; Name=CX296410; organism=Citrus clementina; type=EST; length=559bpback to top |