CX296410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ELUMP (50S ribosomal protein L7/L12 OS=Elusimicrobium minutum (strain Pei191) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEF+V + ++ +IAVIK VR +T L LKEAKDL++G PK KE V+K +AE+ KK++ EAG V++ Sbjct: 56 KTEFNVELTSAAADKKIAVIKVVREITGLGLKEAKDLVDGAPKVIKENVAKAEAEEMKKKVTEAGGVVTL 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_DICNV (50S ribosomal protein L7/L12 OS=Dichelobacter nodosus (strain VCS1703A) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDV++ E +N ++AVIK VRA+T L LKEAK ++ P KE SK++AE KK LEEAGAK + Sbjct: 53 KTEFDVILTEAGAN-KVAVIKVVRAVTGLGLKEAKAAVDEAPSTIKEAASKEEAEKIKKDLEEAGAKAEL 121
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_DESAH (50S ribosomal protein L7/L12 OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDV++ E + +I VIK VRA+T L LKEAK L++ PK KEG+ K++AE K QLE AGA+VSV Sbjct: 58 QTEFDVIL-EAAGDKKIGVIKEVRAITGLGLKEAKALVDEAPKPVKEGIVKEEAEKIKAQLEAAGAQVSV 126
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_DESAD (50S ribosomal protein L7/L12 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 40/70 (57.14%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDV++ N +IAVIKAVRALT L LKEAK ++ P KEGV K +AE+A KQLEEAGA+ + Sbjct: 60 QTEFDVILKSAGGN-KIAVIKAVRALTGLGLKEAKAKVDEAPAAIKEGVEKAEAEEALKQLEEAGAEAEM 128
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_CLONN (50S ribosomal protein L7/L12 OS=Clostridium novyi (strain NT) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 38/70 (54.29%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 K+EFDVV+ S +I VIKAVR LT L LKEAK++++G PK KEGV+K+ AE+ K +LEE GA + + Sbjct: 52 KSEFDVVLANAGSQ-KIKVIKAVRELTGLGLKEAKEIVDGAPKTLKEGVAKEAAEEMKAKLEEVGATIEL 120
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BIFLO (50S ribosomal protein L7/L12 OS=Bifidobacterium longum GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 K EFDV++ V + +I VIKAVRA+TNL L EAK L++G PK E K+DAE AK QLEEAGA V + Sbjct: 57 KDEFDVILSAV-GDKKIQVIKAVRAITNLGLAEAKALVDGAPKAVLEKAKKEDAEKAKAQLEEAGASVEL 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BIFLD (50S ribosomal protein L7/L12 OS=Bifidobacterium longum (strain DJO10A) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 K EFDV++ V + +I VIKAVRA+TNL L EAK L++G PK E K+DAE AK QLEEAGA V + Sbjct: 57 KDEFDVILSAV-GDKKIQVIKAVRAITNLGLAEAKALVDGAPKAVLEKAKKEDAEKAKAQLEEAGASVEL 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BIFAA (50S ribosomal protein L7/L12 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 K EFDV++ V + +I VIKAVRA+TNL L EAK L++G PK E K+DAE AK QLEEAGA V + Sbjct: 57 KDEFDVILSAV-GDKKIQVIKAVRAITNLGLAEAKALVDGAPKAVLEKAKKEDAEKAKSQLEEAGATVEL 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_ALKMQ (50S ribosomal protein L7/L12 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplL PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDV++D S+ +I VIKAVR +T L LKEAK +++ PK KE +SK+DAE K +LEEAGA V++ Sbjct: 51 QTEFDVILDNAGSS-KINVIKAVREITGLGLKEAKGVVDEAPKAIKEAISKEDAEAIKAKLEEAGASVTL 119
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RK12_ASTLO (50S ribosomal protein L12, plastid OS=Astasia longa GN=rpl12 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.787e-13 Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 K EF+++++ S+ RI +IK +R L ++ LKEAKDLIE LPK EGVSK+ AE+ KK LEE+GA V + Sbjct: 64 KLEFNIILESFISSQRIKLIKTLRDLISIGLKEAKDLIETLPKTIYEGVSKEFAEETKKTLEESGASVII 133 The following BLAST results are available for this feature:
BLAST of CX296410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296410 ID=CX296410; Name=CX296410; organism=Citrus clementina; type=EST; length=559bpback to top |