CX296410
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BACV8 (50S ribosomal protein L7/L12 OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=rplL PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.684e-12 Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KT FDVV+ + A++ V+KAV+ L LKEAKD+++G P KEG++KD+AE KK LEEAGA+V + Sbjct: 55 KTSFDVVLKSAGA-AKLQVVKAVKEACGLGLKEAKDMVDGAPSTVKEGLAKDEAESLKKTLEEAGAEVEL 123
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_SYNFM (50S ribosomal protein L7/L12 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 40/70 (57.14%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEF VVI V + +I VIK VRA+TNL LKEAKDL+E +P KE + KD+AE KQL EAGA V + Sbjct: 58 QTEFSVVITGV-GDKKIQVIKEVRAITNLGLKEAKDLVEKVPGVVKEAIPKDEAEAIAKQLTEAGATVEI 126
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_SOLUE (50S ribosomal protein L7/L12 OS=Solibacter usitatus (strain Ellin6076) GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEF VV+ +N +I VIKAVR +T+L LKEAKDL++G PK KEGVSK++A K+ +AGA V V Sbjct: 57 KTEFTVVLTGAGAN-KINVIKAVREVTSLGLKEAKDLVDGAPKPIKEGVSKEEAATIAKKFTDAGATVEV 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_PROMA (50S ribosomal protein L7/L12 OS=Prochlorococcus marinus GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KTEFDVV++ ++A+I V+K VR T L L +AK ++E PK KEG SK+DAE KK +E G KV++ Sbjct: 60 KTEFDVVLESFDASAKIKVLKEVRNATGLGLGDAKAMVEAAPKTIKEGASKEDAEALKKAIEAVGGKVTL 129
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_DICTD (50S ribosomal protein L7/L12 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KT FDV++ + +N +I V+K VR +T L LKEAKDL++ PK KEGVSK +AE+ K +LE GA V + Sbjct: 56 KTTFDVILKDAGAN-KIKVLKVVREITGLGLKEAKDLVDSTPKPIKEGVSKQEAEEIKAKLEAEGAVVEI 124
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_DICT6 (50S ribosomal protein L7/L12 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 36/70 (51.43%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KT FDV++ + +N +I V+K VR +T L LKEAKDL++ PK KEGVSK +AE+ K +LE GA V + Sbjct: 56 KTTFDVILKDAGAN-KIKVLKVVREITGLGLKEAKDLVDSTPKPIKEGVSKQEAEEIKAKLEAEGAVVEI 124
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BORAP (50S ribosomal protein L7/L12 OS=Borrelia afzelii (strain PKo) GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 38/70 (54.29%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 +TEFDV++ +++I VIK VR++T L L EAK L+E PK KEG+SK DAE+ KK+LE GAKV V Sbjct: 55 QTEFDVILMSF-GDSKINVIKEVRSITGLGLGEAKALVESAPKAIKEGLSKSDAEELKKKLEAVGAKVEV 123
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BIFLI (50S ribosomal protein L7/L12 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 39/70 (55.71%), Postives = 49/70 (70.00%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 K EFDV++ V + +I VIKAVRA+T+L L EAK L++G PK E K+DAE AK QLEEAGA V + Sbjct: 57 KDEFDVILSAV-GDKKIQVIKAVRAITSLGLAEAKALVDGAPKAVLEKAKKEDAEKAKAQLEEAGASVEL 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BIFA0 (50S ribosomal protein L7/L12 OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 40/70 (57.14%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 K EF VV+ V + +I VIKAVRA+TNL L EAK L++G PK E K+DAE AK QLEEAGA V + Sbjct: 57 KDEFTVVLSAV-GDKKIQVIKAVRAITNLGLAEAKALVDGAPKPVLENAKKEDAEKAKAQLEEAGATVEL 125
BLAST of CX296410 vs. ExPASy Swiss-Prot
Match: RL7_BACTN (50S ribosomal protein L7/L12 OS=Bacteroides thetaiotaomicron GN=rplL PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.199e-12 Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 2 Query: 56 KTEFDVVIDEVPSNARIAVIKAVRALTNLALKEAKDLIEGLPKKFKEGVSKDDAEDAKKQLEEAGAKVSV 265 KT FDVV+ + A++ V+KAV+ L LKEAKD+++G P KEG++KD+AE KK LEEAGA+V + Sbjct: 55 KTSFDVVLKSAGA-AKLQVVKAVKEACGLGLKEAKDMVDGAPSVVKEGLAKDEAESLKKTLEEAGAEVEL 123 The following BLAST results are available for this feature:
BLAST of CX296410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296410 ID=CX296410; Name=CX296410; organism=Citrus clementina; type=EST; length=559bpback to top |