CX296661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_OSTTA (Cryptochrome DASH, chloroplastic/mitochondrial OS=Ostreococcus tauri GN=Ot01g06320 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 66/189 (34.92%), Postives = 98/189 (51.85%), Query Frame = 2 Query: 158 RRASIVWFRNDLRVHDNESLNTA-----NNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGAD--AVYAHREVSHDEVKSEEKIEAAMKDE------GIEVKYFWGSTLYHLDDLPFK----LGEMPTNYGGFREKVKG-VEIRKTIEA 670 R ++WFRNDLR+ DN + A + V V+PVY FD + S G + G R F +E V DL+ +L+A GSDL+VR GK V+ EL D + EV+ +E + + +E A ++ ++ WGSTLYH+DD+PF L ++P + FR KV+ ++R I A Sbjct: 3 RTRVVIWFRNDLRLLDNACVARAATLASESSDVEVVPVYVFDETYFKPSKRGLARFGAGRGKFTLECVGDLKTSLRALGSDLLVRCGKSRDVIAELTLTGANDRTIILTQTEVTSEETEMDVAVERATRERARGGAASATMERHWGSTLYHIDDVPFDVTSGLSDLPDVFTPFRNKVESKCKVRDVIPA 191
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_IDILO (Cryptochrome DASH OS=Idiomarina loihiensis GN=cry PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.849e-16 Identity = 51/181 (28.18%), Postives = 90/181 (49.72%), Query Frame = 2 Query: 161 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFW---GSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGLP 694 R + FRNDLRV DN +L A S +++ +CF+P G G +R +FL +S+ LR L+ RG L+V G + +L EL DA++ + + E+++ + + F +TL+ +LPF+L ++P + FR+KV+ + +++ ++ L LP Sbjct: 15 RLGLFVFRNDLRVEDNLALYEAAQRSETLICCFCFNPTQNKYGHYGIPAMGKHRFTFLQQSLKQLRTELEMRGQKLIVLTGTFDRILTELISERQVDAIFLSQHQGY-----YERLQLGLLQQRFPFLPFHETPNNTLFSEQELPFELADLPETFSQFRKKVEPLSRNFSVQPVNALPSLP 190
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: PHR_SYNP6 (Deoxyribodipyrimidine photo-lyase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=phr PE=1 SV=4) HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 41/152 (26.97%), Postives = 76/152 (50.00%), Query Frame = 2 Query: 170 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGF 625 + W R DLR+ DN L A +S ++ ++C DP+ + P R ++L + +L++ Q GS L++ G P+ ++ +LA+ + A+AVY ++++ + ++ AA+K GI W L+ D + G + YG F Sbjct: 6 LFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMA-----PARVAYLQGCLQELQQRYQQAGSRLLLLQGDPQHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQLLHSPDQILSGSGNPYSVYGPF 152 The following BLAST results are available for this feature:
BLAST of CX296661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296661 ID=CX296661; Name=CX296661; organism=Citrus clementina; type=EST; length=694bpback to top |