CX296661
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2) HSP 1 Score: 354.755 bits (909), Expect = 2.605e-97 Identity = 169/209 (80.86%), Postives = 194/209 (92.82%), Query Frame = 2 Query: 68 FKSTLSANPLQSPLSLGPHRPLDPNNGAAIRRASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGLP 694 FKST++ANPLQSPLS+ P RP+DP++ AA+RRA++VWFRNDLRVHDNE LN+AN+E VSVLPVYCFDPRDYGKSSSGFDKTGP+RA FLIESVS+LRKNLQARGS+LVVRVGKPE VLVELAK IGADAVYAHREVSHDEVK+E KIE AMK+EG+EVKYFWGSTLYHLDDLPFK+ ++P+NYG F++KV+ +EIRKTI ALDQLK LP Sbjct: 84 FKSTIAANPLQSPLSIVPRRPVDPSSAAALRRAAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSSGFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHREVSHDEVKAEGKIETAMKEEGVEVKYFWGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLP 292
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus GN=cry PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.478e-39 Identity = 80/176 (45.45%), Postives = 119/176 (67.61%), Query Frame = 2 Query: 170 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKV-KGVEIRKTIEALDQLKGLP 694 +VW+RNDLRVHD+E L +A +++ V+ +YCFDPR +GK+ GF+KTGP+RA FL+ESV+DLR++L+ GSDL+VR G PE V+ L + AV+ H EV+ +E+ E ++AA+ + V+ FWG+TL H DDLPF + +P + FR++V + I + A +L LP Sbjct: 7 LVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAPFGFEKTGPFRARFLLESVADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEVTSEELVVERDLQAALAPLNVPVRSFWGTTLVHPDDLPFAIEAIPELFTDFRKQVERSAAINPPLPAPAKLPPLP 182
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_SYNY3 (Cryptochrome DASH OS=Synechocystis sp. (strain PCC 6803) GN=cry PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.963e-36 Identity = 75/177 (42.37%), Postives = 113/177 (63.84%), Query Frame = 2 Query: 170 IVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKV--KGVEIRKTIEALDQLKGLP 694 +VWFRNDLR+HD+E L+ A +++ VYC+DPR + ++ GF KTGP+R++FL +SV +L ++LQ G+ L+V G PE V+ ++AK I A +Y HREV+ +E+ E + + GIE K +WGSTL H +DLPF + ++P + FR+ + K + IR A QL P Sbjct: 9 LVWFRNDLRLHDHEPLHRALKSGLAITAVYCYDPRQFAQTHQGFAKTGPWRSNFLQQSVQNLAESLQKVGNKLLVTTGLPEQVIPQIAKQINAKTIYYHREVTQEELDVERNLVKQLTILGIEAKGYWGSTLCHPEDLPFSIQDLPDLFTKFRKDIEKKKISIRPCFFAPSQLLPSP 185
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_XENLA (Cryptochrome DASH OS=Xenopus laevis GN=cry-dash PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.743e-36 Identity = 82/182 (45.05%), Postives = 115/182 (63.19%), Query Frame = 2 Query: 161 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIG-ADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFK-LGEMPTNYGGFREKVKGV-EIRKTIEALDQLKGLP 694 R I RNDLR+HDNE L+ A+ + ++P+YCFDPR Y G F KTGP+R FL+ESV DLR L+ +GS+L++R GKPE V+ +L K +G AV H E + +E E ++ A GI+ + FWGSTLYH +DLPF+ + +P Y FR+ V+ ++R T + D+LK LP Sbjct: 6 RVIICLLRNDLRLHDNEVLHWAHRNADQIVPLYCFDPRHYVGTHYFNFPKTGPHRLKFLLESVRDLRITLKKKGSNLLLRRGKPEEVIEDLVKQLGNVSAVTLHEEATKEETDVESAVKQACTRLGIKYQTFWGSTLYHREDLPFRHISSLPDVYTQFRKAVETQGKVRPTFQMPDKLKPLP 187
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_DANRE (Cryptochrome DASH OS=Danio rerio GN=cry-dash PE=2 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 6.315e-35 Identity = 81/182 (44.51%), Postives = 110/182 (60.44%), Query Frame = 2 Query: 161 RASIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDY-GKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYA-HREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFK-LGEMPTNYGGFREKVKGV-EIRKTIEALDQLKGLP 694 R I RNDLR+HDNE + A + ++P+YCFDPR Y G F KTGP+R FL++SV DLR L+ GS L+VR GKPE V+ EL K +G+ + A H EV+ +E EEK++ + V+ FWGSTLYH DDLPF +G +P Y FR+ V+ +R + +Q+K P Sbjct: 5 RTVICLLRNDLRLHDNEVFHWAQRNAEHIIPLYCFDPRHYQGTYHYNFPKTGPFRLRFLLDSVKDLRALLKKHGSTLLVRQGKPEDVVCELIKQLGSVSTVAFHEEVASEEKSVEEKLKEICCQNKVRVQTFWGSTLYHRDDLPFSHIGGLPDVYTQFRKAVEAQGRVRPVLSTPEQVKSPP 186
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.134e-34 Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 2 Query: 167 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSS-GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEG--IEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 640 +I+WFRNDLRV DN++L A + S ++LPVYC DPR + + F KTG R FL+E + DLRKNL RG +L++R GKPE +L LAK GA V+AH+E +EV E + +K G +++ WGST+YH DDLPF + ++P Y FR+ V+ Sbjct: 86 TILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQGLKRVGNSTKLELIWGSTMYHKDDLPFDVFDLPDVYTQFRKSVE 246
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.191e-33 Identity = 80/188 (42.55%), Postives = 110/188 (58.51%), Query Frame = 2 Query: 167 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSS--GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAM--------------KDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQL 682 +IVWFRNDLRV DNE++ A S +VLPVYC DPR S+ GF KTG RA FLIE + DL++NL +G DL++R GKPE +L +AKA+ A VYAH+E +E+ E + + K +++ WG+TLYH+DDLPF + +P Y FR K VE + ++ +L Sbjct: 86 AIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVDPRISAGSTHYFGFPKTGALRAQFLIECLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAVTAHTVYAHKETCSEELLVEHLVRKGLEQVVIPQGGASNQKKPRNPKLQLIWGATLYHVDDLPFSVNNLPDVYTQFR---KAVESKSSVRNCSKL 270
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=3 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33 Identity = 78/175 (44.57%), Postives = 108/175 (61.71%), Query Frame = 2 Query: 167 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSS-GFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMK------------DEG----IEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 640 +IVWFRNDLRV DNE+L A S ++LPVYC DPR +G + G KTG RA F+IE ++DL++NL RG DL+++ GKPE ++ LAKA A VYAH+E +EVK E+ + ++ D G +++ WGST+YH+DDLPF +P Y FR+ V+ Sbjct: 80 AIVWFRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQFIIECLNDLKRNLVKRGLDLLIQHGKPEDIVPSLAKAYKAHTVYAHKETCSEEVKVEKMVTRNLQKLVSPSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLPFDCESLPDVYTQFRKSVE 254
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_RHOBA (Cryptochrome DASH OS=Rhodopirellula baltica GN=cry PE=3 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 7.226e-31 Identity = 68/175 (38.86%), Postives = 104/175 (59.43%), Query Frame = 2 Query: 167 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKV-KGVEIRKTIEALDQLKG 688 ++VWFRNDLR D+E A+ V+C DPR + + GF +TGP+RA FLIE+++DLR L++ G +L+VRVG+PETVL L ++ DAV+ H E +E + E ++ GI +G TL H D+LPF++ + P + FR+++ K E R +E ++ G Sbjct: 4 ALVWFRNDLRTIDHEPFLRASTAD-RCFAVHCIDPRQFETTELGFQRTGPFRARFLIENLTDLRSRLRSLGGELIVRVGRPETVLQHLLPSLAIDAVHFHHEPRTEEADTAESVQQLCDQHGIATHVAYGDTLIHPDELPFEIADTPELFTDFRKEIEKQCEARSPLEEPIRIHG 177
BLAST of CX296661 vs. ExPASy Swiss-Prot
Match: CRYD_NATPD (Cryptochrome DASH OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=cry PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.989e-30 Identity = 68/158 (43.04%), Postives = 102/158 (64.56%), Query Frame = 2 Query: 167 SIVWFRNDLRVHDNESLNTANNESVSVLPVYCFDPRDYGKSSSGFDKTGPYRASFLIESVSDLRKNLQARGSDLVVRVGKPETVLVELAKAIGADAVYAHREVSHDEVKSEEKIEAAMKDEGIEVKYFWGSTLYHLDDLPFKLGEMPTNYGGFREKVK 640 ++VWFR+DLRV DN +L A + +V+PVY FDP Y +S G KTG +RA F ++V+DLR +L+ RG DL+VR G+P TV+ ELA+ GADAVYA + + +E + + +A+ D GI ++ W TLYH DDLP ++ + +R++ + Sbjct: 4 AVVWFRDDLRVTDNPTLADAVAAAETVIPVYTFDPDRYTESEYGPPKTGGHRAVFRRQAVADLRASLRDRGGDLLVRSGRPATVVPELAQRAGADAVYAQTKPATEERRRAADVASALDDAGIALRQRWTHTLYHPDDLPTPPTDIDDTFTPWRKETE 161 The following BLAST results are available for this feature:
BLAST of CX296661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296661 ID=CX296661; Name=CX296661; organism=Citrus clementina; type=EST; length=694bpback to top |