CX296777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ECO5E (50S ribosomal protein L17 OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ECO57 (50S ribosomal protein L17 OS=Escherichia coli O157:H7 GN=rplQ PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ECO55 (50S ribosomal protein L17 OS=Escherichia coli (strain 55989 / EAEC) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ECO45 (50S ribosomal protein L17 OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ECO27 (50S ribosomal protein L17 OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ECO24 (50S ribosomal protein L17 OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRANE 405 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ + Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSEK 121
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ALISL (50S ribosomal protein L17 OS=Aliivibrio salmonicida (strain LFI1238) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M M LV+HE I+TTV KAKE+RR+ + ++ L K S+ R A A R ++V+ KLFTEL R+ RAGGYTR+L+ R GD APMAYIE VDR Sbjct: 8 RQLNRNSSHRKAMFSNMACSLVRHEIIKTTVPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTELGPRFAQRAGGYTRILKCGFRTGDKAPMAYIELVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPY (50S ribosomal protein L17 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPS (50S ribosomal protein L17 OS=Yersinia pseudotuberculosis GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPP (50S ribosomal protein L17 OS=Yersinia pestis (strain Pestoides F) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119 The following BLAST results are available for this feature:
BLAST of CX296777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296777 ID=CX296777; Name=CX296777; organism=Citrus clementina; type=EST; length=694bpback to top |