CX296777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPN (50S ribosomal protein L17 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPG (50S ribosomal protein L17 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPE (50S ribosomal protein L17 OS=Yersinia pestis GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPB (50S ribosomal protein L17 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERPA (50S ribosomal protein L17 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERP3 (50S ribosomal protein L17 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K ++ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDNVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_RHOFD (50S ribosomal protein L17 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 57/112 (50.89%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 RKLNR + HR++MLR M++ L++HE I+TT+ KAKE+RR+ + M+ L KE ++ R A +R D + KLF +L R+K R GGYTR+L+ RVGD APMA +E VDRA Sbjct: 8 RKLNRTSEHRLAMLRNMMNSLIEHEVIKTTLPKAKELRRVVEPMITLAKEATVANRRLAFDRLRDRDSVVKLFNDLGPRFKARPGGYTRILKMGFRVGDNAPMALVELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_GRABC (50S ribosomal protein L17 OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 57/111 (51.35%), Postives = 78/111 (70.27%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 RKL + HR +M R M L+KHE+I TT+ KAKE+R +A+ ++ LGK G L A R+A A +R + ++ KLF+ +A RYK R GGYTR+L++ +R GDAA MA IE VDR Sbjct: 8 RKLGVTSSHRQAMFRNMAVALIKHEQITTTLPKAKELRPVAEKLITLGKRGGLHARRQAYAQLRDEVIVTKLFSAIAERYKARQGGYTRVLKAGVRYGDAASMAVIELVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ENT38 (50S ribosomal protein L17 OS=Enterobacter sp. (strain 638) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRS 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_EDWI9 (50S ribosomal protein L17 OS=Edwardsiella ictaluri (strain 93-146) GN=rplQ PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 56/112 (50.00%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRS 119 The following BLAST results are available for this feature:
BLAST of CX296777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296777 ID=CX296777; Name=CX296777; organism=Citrus clementina; type=EST; length=694bpback to top |