CX296777
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_ERWCT (50S ribosomal protein L17 OS=Erwinia carotovora subsp. atroseptica GN=rplQ PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 57/112 (50.89%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDR+ Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRS 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_BRASB (50S ribosomal protein L17 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rplQ PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 RKLNR HR +M M + L+KHE+I TT+ KAKE+R + + +V LGK+G L R+A A +R D + KLF LA RYKDR GGYTR++++ R GD A MA IEFVDR Sbjct: 8 RKLNRTAEHRKAMFANMCAALIKHEQIVTTLPKAKELRPIVEKLVTLGKKGGLALRRQAIAEMRDVDQVKKLFDVLAPRYKDRNGGYTRIIKAGFRYGDNAAMAVIEFVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_AERS4 (50S ribosomal protein L17 OS=Aeromonas salmonicida (strain A449) GN=rplQ PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R + ++ KLF EL RY +RAGGYTR+L+ R GD APMAYIE VDR Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNAIVAKLFNELGPRYLERAGGYTRILKCGFRAGDNAPMAYIELVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_AERHH (50S ribosomal protein L17 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rplQ PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M R M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R + ++ KLF EL RY +RAGGYTR+L+ R GD APMAYIE VDR Sbjct: 8 RQLNRNSSHRQAMFRNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNAIVAKLFNELGPRYLERAGGYTRILKCGFRAGDNAPMAYIELVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_YERE8 (50S ribosomal protein L17 OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 57/112 (50.89%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDRA 399 R+LNR + HR +M R M LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++++ KLF EL R+ RAGGYTR+L+ R GD APMAYIE VDRA Sbjct: 8 RQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRA 119
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_VIBFM (50S ribosomal protein L17 OS=Vibrio fischeri (strain MJ11) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++V+ KLFTEL R+ RAGGYTR+L+ R GD APMAYIE VDR Sbjct: 8 RQLNRNSSHRKAMFSNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTELGPRFAQRAGGYTRILKCGFRAGDKAPMAYIELVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_VIBF1 (50S ribosomal protein L17 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 58/111 (52.25%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M M S LV+HE I+TT+ KAKE+RR+ + ++ L K S+ R A A R ++V+ KLFTEL R+ RAGGYTR+L+ R GD APMAYIE VDR Sbjct: 8 RQLNRNSSHRKAMFSNMASSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTELGPRFAQRAGGYTRILKCGFRAGDKAPMAYIELVDR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_THETN (50S ribosomal protein L17 OS=Thermoanaerobacter tengcongensis GN=rplQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 55/110 (50.00%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 61 FRKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFV 390 +RKL RP+ R +MLR +V+ +++ERI TT A+AKEVR++A+ M+ LGK G L A R+A A++ + V+ KLF ++A RYK+R GGYTR+ + R GD AP+A IE V Sbjct: 3 YRKLGRPSDQRRAMLRNLVTDFLRYERITTTEARAKEVRKIAEKMITLGKRGDLHARRQALAYILDESVVKKLFDDIAPRYKERNGGYTRIFKLGPRRGDGAPLAVIELV 112
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHEPW (50S ribosomal protein L17 OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL R+++R GGYTR+L+ +R GD APMAYIE V R Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTELGPRFQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118
BLAST of CX296777 vs. ExPASy Swiss-Prot
Match: RL17_SHEPA (50S ribosomal protein L17 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rplQ PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 1 Query: 64 RKLNRPTGHRMSMLRTMVSQLVKHERIETTVAKAKEVRRLADNMVQLGKEGSLCAARRAAAFVRGDDVIHKLFTELAYRYKDRAGGYTRLLRSRIRVGDAAPMAYIEFVDR 396 R+LNR + HR +M R M +V+HE I+TTVAKAKE+RR+ + ++ L K S+ R A A R +V+ KLFTEL R+++R GGYTR+L+ +R GD APMAYIE V R Sbjct: 8 RQLNRNSSHRQAMFRNMACSIVRHEVIKTTVAKAKELRRVVEPLITLAKSDSVANRRLAFARTRDAEVVGKLFTELGPRFQERPGGYTRILKCGLRTGDKAPMAYIELVGR 118 The following BLAST results are available for this feature:
BLAST of CX296777 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296777 ID=CX296777; Name=CX296777; organism=Citrus clementina; type=EST; length=694bpback to top |