CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BOVIN (Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.914e-45 Identity = 95/177 (53.67%), Postives = 117/177 (66.10%), Query Frame = -3 Query: 198 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGEDG++ISVP+ AV LA A+L+ E V+ GL ARDSLRLEAGLCLYGND+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P R+ S + +G IG +TSG SPCLKKN+AMGYV + GT + +EVR K ++KMPFV T YY Sbjct: 220 TGEDGVEISVPAAEAVHLAAALLKNPE--VKLAGLAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCPSPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_HUMAN (Aminomethyltransferase, mitochondrial OS=Homo sapiens GN=AMT PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.499e-45 Identity = 97/177 (54.80%), Postives = 119/177 (67.23%), Query Frame = -3 Query: 198 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGEDG++ISVP AV LA AIL+ E V+ GL ARDSLRLEAGLCLYGND+++H TPVE L+W +GKRRRA F GA+ I+ QL RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT + +EVR K ++KMPFVPT YY Sbjct: 226 TGEDGVEISVPVAGAVHLATAILKNPE--VKLAGLAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCPSPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYY 400
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_DICDI (Aminomethyltransferase, mitochondrial OS=Dictyostelium discoideum GN=gcvT PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.497e-45 Identity = 97/184 (52.72%), Postives = 121/184 (65.76%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKS----EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLD-EGPPVRRVGFFAGGPPARSHSKVHDEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +ISVPS++AV LA+ L S E ++ GLGARDSLRLEAGLCLYG+D+ +TP+EA L W I KRRR EGGF GA I KQL +G P +RVG G PAR + D N IG++TSG SP +++I+M YVK+ K GT+V + +RGK I+KMPFVPT Y K Sbjct: 219 TGEDGFEISVPSKQAVRLAELFLATSNASIESGIKPAGLGARDSLRLEAGLCLYGHDLNDDITPIEASLNWLISKRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGTISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNYKK 402
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MOUSE (Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.763e-44 Identity = 94/177 (53.11%), Postives = 119/177 (67.23%), Query Frame = -3 Query: 198 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGEDG++ISVP+ AV LA +L+ E V+ GL ARDSLRLEAGLCLYGND+++H TPVE L+W +GKRRR F GA+ I+ QL RRVG G P R+HS + + +G IG +TSG SP LKKN+AMGYV + GT++ +EVR K ++KMPFVPT YY Sbjct: 226 TGEDGVEISVPATGAVHLATTLLKNPE--VKLAGLAARDSLRLEAGLCLYGNDIDEHTTPVEGSLSWTLGKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCPSPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYY 400
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YEAST (Aminomethyltransferase, mitochondrial OS=Saccharomyces cerevisiae GN=GCV1 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.680e-33 Identity = 84/187 (44.92%), Postives = 115/187 (61.50%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRR----AEGGFLGAEKILKQLDEGPPVR-RVGF--FAGGPPARSHSKVH-DEQGNPIGEITSGGFSPCLKK-NIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +IS+ +E+AV+ A+ +L + ++ GL ARDSLRLEAG+CLYG+++++ +TPVEA L W I K RR + F G KI+ QL+ + RVGF GP AR+ K+ + +G +TSG SP L NI YV+ G HK GTK+ ++VR K Y + KMP VPT YYK Sbjct: 215 TGEDGFEISIANEKAVEFAEQLL--ANPVMKPIGLAARDSLRLEAGMCLYGHELDESITPVEAALNWVISKSRRDLVDQKYWFNGYAKIMDQLNNKTYSKVRVGFKYLKKGPAARNGVKIFLPDAETEVGLVTSGSASPTLNNINIGQAYVQKGYHKKGTKLLVQVRNKFYPIELAKMPLVPTHYYK 399
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_HALOH (Aminomethyltransferase OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=gcvT PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.838e-27 Identity = 66/173 (38.15%), Postives = 101/173 (58.38%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G ++ + ++AV++ +A++E S+ + GLGARD+LRLE G CLYGND++++ P+EAGL W + + + F+G +LK +EG + VGF G H + G+ IG +TSG SP L + I MGYV+ G + I VR +A G + K+PF+ Sbjct: 188 TGELGYELYLSPDKAVEVWQALMEAGSDLGLIPAGLGARDTLRLEKGYCLYGNDIDENTHPLEAGLGWTV---KFDKASFIGKRALLKYKEEGLSRKLVGFKLKGRGIPRHGYPIKDNGDQIGVVTSGSMSPTLSEGIGMGYVRYDKATPGESITIVVRNRAITGEVVKLPFI 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PROMM (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvT PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 70/180 (38.89%), Postives = 103/180 (57.22%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG ++ + +E L +L +EG + GLG+RD+LRLEA + LYG DM+ + TP EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L++ IA+GY+ + L + G +V++E+RGK + + K PF Y +PS Sbjct: 202 TGEDGFELLLKAEAGRALWLKLL--AEGVI-PCGLGSRDTLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLEEAIALGYLPTALARIGNEVEVEIRGKHHRATVVKRPF----YRRPS 372
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACA2 (Aminomethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42) GN=gcvT PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.290e-25 Identity = 65/172 (37.79%), Postives = 99/172 (57.56%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ +E AV L K IL E + + GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+ + + + F G + +Q ++G P + VG H + G PIGE+T+G SP LKKNI + +K+ + GT+V++E+R K I + PF Sbjct: 190 TGEDGFELYCRNEDAVHLFKEILAAGEHEGLVPCGLGARDTLRFEAKLALYGQELTKDITPIEAGIGFAV--KHKKDSDFFGKSVLREQKEKGAPRKLVGLEMIEKGIPRHGYAVKKDGVPIGEVTTGTQSPTLKKNIGLALIKTEFSEVGTEVEVEIRKKTVKAKIVRTPF 359
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THETN (Aminomethyltransferase OS=Thermoanaerobacter tengcongensis GN=gcvT PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.684e-25 Identity = 68/179 (37.99%), Postives = 101/179 (56.42%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +I +P+E AV L + ILE + ++ GLGARD+LR EAGL LYGN++ + +TP+EAGL + + + +G F+G + +LKQ ++G + VGF G H IG +T+G FSP LKKNI + + S + G ++++ +R K I F Y K Sbjct: 199 TGEDGFEIYMPNEHAVTLWEKILEAGKDYGLKPAGLGARDTLRFEAGLPLYGNELGEDITPLEAGLGFFV---KFDKGNFIGKDALLKQKEQGLKRKLVGFEMIGNGIPRHGYEVQADNQKIGYVTTGYFSPTLKKNIGLALIDSKYAQIGNQIEVIIRNKPLKAVIVDKNFYKKNYKK 374
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CYAP8 (Aminomethyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=gcvT PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.684e-25 Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ V E DL +++ + V GLGARD+LRLEA +CLY D++ + TP+EAGL W + ++G F+G + + KQ +G R VG G H +G +GE+TSG P + K IA+ YV L K GT +++E+RG+ + K PF Sbjct: 197 TGEDGFEVMVDPEVGQDLWRSLFQAG---VTPCGLGARDTLRLEAAMCLYSQDIDDNTTPLEAGLNWLV--HLDSKGDFIGRDILEKQKAQGVERRLVGLQMEGRHIARHGYPVLYEGKIVGEVTSGTLPPTVGKAIALAYVPRSLGKVGTPLEVEIRGQNCQAIVVKKPF 362 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |