CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FLATR (Aminomethyltransferase, mitochondrial OS=Flaveria trinervia GN=GDCST PE=3 SV=1) HSP 1 Score: 313.923 bits (803), Expect = 5.503e-85 Identity = 149/180 (82.78%), Postives = 165/180 (91.67%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +ISVPSE AVDLAKAILEKSEGKVR TGLGARDSLRLEAGLCLYGNDMEQH+TPVEAGLTWAIGKRRRAEGGFLGAE ILKQ+ +GP +RRVG F+ GPPARSHS++ +EQG IGE+TSGGFSPCLKKNI MGYVKSGLHK GTK+KI +RGK Y+G++TKMPFVPTKYYKP+ Sbjct: 228 TGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRAEGGFLGAEVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEQGENIGEVTSGGFSPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKPA 407
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ARATH (Aminomethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=GDCST PE=1 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 2.091e-84 Identity = 152/180 (84.44%), Postives = 164/180 (91.11%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +ISVP E AVDLAKAILEKSEGKVR TGLGARDSLRLEAGLCLYGNDMEQH++PVEAGLTWAIGKRRRAEGGFLGA+ IL+QL +GP +RRVGFF+ GPPARSHS+VHDE GN IGEITSGGFSP LKKNIAMGYVKSG HK GTKVKI VRGK Y+G+ITKMPFV TKYYKP+ Sbjct: 229 TGEDGFEISVPDEHAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHISPVEAGLTWAIGKRRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGFSPNLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKPT 408
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SOLTU (Aminomethyltransferase, mitochondrial OS=Solanum tuberosum GN=GDCST PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 2.731e-84 Identity = 148/179 (82.68%), Postives = 162/179 (90.50%), Query Frame = -3 Query: 192 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKP 728 TGEDG +ISVPSE A+DLAKA+LEKSEGK+R TGLGARDSLRLEAGLCLYGNDMEQH TPVEAGLTWAIGKRRRAEGGFLGAE ILKQ++EGP +RRVGFF+ GPP RSHS++ D G IGEITSGGFSPCLKKNIAMGYVK+G HKAGT VKI +RGK+YDG +TKMPFVPTKYYKP Sbjct: 228 TGEDGFEISVPSENALDLAKALLEKSEGKIRLTGLGARDSLRLEAGLCLYGNDMEQHTTPVEAGLTWAIGKRRRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRSHSEIQDSNGQNIGEITSGGFSPCLKKNIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVTKMPFVPTKYYKP 406
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FLAPR (Aminomethyltransferase, mitochondrial OS=Flaveria pringlei GN=GDCST PE=2 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 3.567e-84 Identity = 147/180 (81.67%), Postives = 165/180 (91.67%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +ISVPSE AVDLAKAILEKSEGKVR TGLGARDSLRLEAGLCLYGNDMEQH+TPVEAGLTWAIGKRRRAEGGFLGA+ ILKQ+ +GP +RRVG F+ GPPARSHS++ +E+G IGE+TSGGFSPCLKKNI MGYVKSGLHK GTK+KI +RGK Y+G++TKMPFVPTKYYKP+ Sbjct: 228 TGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGFSPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKPA 407
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FLAAN (Aminomethyltransferase, mitochondrial OS=Flaveria anomala GN=GDCST PE=3 SV=1) HSP 1 Score: 311.227 bits (796), Expect = 3.567e-84 Identity = 147/180 (81.67%), Postives = 165/180 (91.67%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +ISVPSE AVDLAKAILEKSEGKVR TGLGARDSLRLEAGLCLYGNDMEQH+TPVEAGLTWAIGKRRRAEGGFLGA+ ILKQ+ +GP +RRVG F+ GPPARSHS++ +E+G IGE+TSGGFSPCLKKNI MGYVKSGLHK GTK+KI +RGK Y+G++TKMPFVPTKYYKP+ Sbjct: 228 TGEDGFEISVPSENAVDLAKAILEKSEGKVRLTGLGARDSLRLEAGLCLYGNDMEQHITPVEAGLTWAIGKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGFSPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKPA 407
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PEA (Aminomethyltransferase, mitochondrial OS=Pisum sativum GN=GDCST PE=1 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 8.786e-83 Identity = 145/180 (80.56%), Postives = 163/180 (90.56%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +ISVPSE V+LAKA+LEKSEGK+R TGLGARDSLRLEAGLCLYGND+EQH+TP+EAGLTWAIGKRRRAEGGFLGA+ ILKQL +GP +RRVGF + GPP RSHS++ DE GN IGE+TSGGFSPCLKKNIA+GYVKSGLHKAGTKVKI +RGK +G +TKMPFVPTKYYKPS Sbjct: 229 TGEDGFEISVPSEHGVELAKALLEKSEGKIRLTGLGARDSLRLEAGLCLYGNDLEQHITPIEAGLTWAIGKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGFSPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKPS 408
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MESCR (Aminomethyltransferase, mitochondrial OS=Mesembryanthemum crystallinum GN=GDCST PE=2 SV=1) HSP 1 Score: 301.212 bits (770), Expect = 3.692e-81 Identity = 144/178 (80.90%), Postives = 160/178 (89.89%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +ISVP+E AVDLAKA+LEKSEGKVR TG GARDSLRLEAGLCLYGND+EQH+TP+EAGLTWA+GKRRRAEGGFLGAE ILKQ+ +GPP RRVGF + GPPAR HS++ +E+G IGEITSGGFSPCLKKNIAMGYVKSG HKAGTKV I VRGK Y+G +TKMPFVPTKYYK Sbjct: 229 TGEDGFEISVPNEYAVDLAKAMLEKSEGKVRLTGRGARDSLRLEAGLCLYGNDLEQHITPIEAGLTWAVGKRRRAEGGFLGAEVILKQIADGPPQRRVGFISSGPPARGHSEIQNEKGESIGEITSGGFSPCLKKNIAMGYVKSGNHKAGTKVNILVRGKPYEGVVTKMPFVPTKYYK 406
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SCHPO (Probable aminomethyltransferase, mitochondrial OS=Schizosaccharomyces pombe GN=gcv1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.415e-48 Identity = 94/178 (52.81%), Postives = 125/178 (70.22%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG ++S+P E +VD A +L ++ +VR GLGARD+LRLEAG+CLYG+D++ +PVE L+W IGKRRR EGGF+G+ +ILK+L +GP RRVGF PAR H + G +G++TSG SP L KNIAMGY+ +GLH+ GT I+VR K + + +MPFV T YYK Sbjct: 213 TGEDGFEVSIPEEVSVDFASTLL--ADTRVRPIGLGARDTLRLEAGMCLYGSDIDDTTSPVEGSLSWIIGKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPAR-HGSAVEVDGVEVGQVTSGCPSPTLGKNIAMGYISTGLHQVGTPAHIKVRNKLHPAQVVRMPFVETHYYK 387
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CHICK (Aminomethyltransferase, mitochondrial OS=Gallus gallus GN=AMT PE=2 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.577e-46 Identity = 96/177 (54.24%), Postives = 123/177 (69.49%), Query Frame = -3 Query: 198 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGEDG++ISVP+ RAV+LA+ +L E V GL ARDSLRLEAGLCLYGND+++ TPVEAGL W +GKRRR F GA I++Q+ E P +RVG + GPP R + + +G P+G +TSG SP L KNIAMGYV++ + GT + +EVR K + +TKMPFVPT YY Sbjct: 215 TGEDGVEISVPAGRAVELAERLLGCPE--VWPAGLAARDSLRLEAGLCLYGNDIDESTTPVEAGLLWTLGKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLTSVGPPLRPPAAILGPEGTPVGTVTSGCPSPSLGKNIAMGYVQAAHSRPGTTLTVEVRKKQHPALVTKMPFVPTHYY 389
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CANFA (Aminomethyltransferase, mitochondrial OS=Canis familiaris GN=AMT PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.577e-46 Identity = 97/177 (54.80%), Postives = 120/177 (67.80%), Query Frame = -3 Query: 198 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGEDG++ISVP+ AV LA A+LE E V+ GL ARDSLRLEAGLCLYG+D+++H TPVE L+W +GKRRRA F GA I+ QL RRVG G P R+HS + + +G IG +TSG SPCLKKN+AMGYV S + GT + +EVR K ++KMPFV T YY Sbjct: 226 TGEDGVEISVPAAAAVRLAAALLENPE--VKLAGLAARDSLRLEAGLCLYGSDIDEHTTPVEGSLSWTLGKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCPSPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYY 400 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |