CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_DECAR (Aminomethyltransferase OS=Dechloromonas aromatica (strain RCB) GN=gcvT PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21 Identity = 64/171 (37.43%), Postives = 99/171 (57.89%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I +P+ A L + + V GLGARD+LRLEAG+ LYG DM++ V+P++AGL W + + F+G ++ + + + G R H KV +QG+ GEITSG FSP L+++IA+ + G+ + G +V++++RGKA +TK F Sbjct: 195 TGEDGYEIMMPAGEAEALWNKL---NAAGVAPCGLGARDTLRLEAGMNLYGQDMDETVSPLDAGLAWTVS--LNTDRDFVGKAALVTNGQQKQFLGLILLDKG--VLRGHQKVMTKQGD--GEITSGSFSPTLQQSIALARLPLGV-QIGDEVEVDIRGKALKAKVTKPVF 355
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_COLP3 (Aminomethyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvT PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.607e-21 Identity = 68/173 (39.31%), Postives = 95/173 (54.91%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA-RSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG +I VP+ A D + +L++ V GLGARD+LRLEAG+ LYG DM++ V+P+ A + W I + F+G + + Q G + VG RSH V E GN GEITSG FSP L ++A+ V + K G +++E+R K +TK FV Sbjct: 190 TGEDGYEIIVPNNSAEDFWQKLLDEG---VVPCGLGARDTLRLEAGMNLYGLDMDETVSPLAANMAWTI-SWEPTDRDFIGRDVLTAQKAAGDQPKLVGLVLEAKGVLRSHQVVVTEFGN--GEITSGTFSPTLGHSVALARVPRSV-KVGDTIEVEMRKKLIKVQVTKPSFV 355
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BURM1 (Aminomethyltransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21 Identity = 66/178 (37.08%), Postives = 95/178 (53.37%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF------AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ VP+ L A+ + VR GLGARD+LRLEAG+ LYG DM+ V+P++AGL W + F+G E + + +G VG G R+H KV G GEITSG FSP ++++IA V + + + G V +++R K + K+PFV Sbjct: 198 TGEDGFEVIVPAVHVEALWNALQQHG---VRPCGLGARDTLRLEAGMNLYGQDMDDTVSPLDAGLAWTVD--LSTPRAFVGREALER---DGTRAAFVGLILQKENGKAGGVLRAHQKVVTPHGE--GEITSGTFSPSMQESIAFARVPTAV-QVGDTVHVQIRDKQLPARVVKLPFV 364
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_DESRM (Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG--FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGE G ++ P+ A + +AI+ + +R GLGARD+LR EA L LYG+++ ++P+ AGL W + K + E F+G E +LKQ + G + VG G P + ++ ++G +G ITSG F+P L KN+ +GYV+ G ++ I VR K I K PF Sbjct: 191 TGEAGFELYFPASHAERVWQAIMATGATDGLRPVGLGARDTLRFEACLALYGHELTDDISPLMAGLGWTV-KFNKPE--FVGKEPLLKQKEAGTTYQLVGLEMIDRGIPRQGYAIF--KEGQEVGWITSGTFAPTLGKNMGLGYVEIPFADVGKELNIMVRNKPLKARIVKKPF 359
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CLOBM (Aminomethyltransferase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 66/164 (40.24%), Postives = 92/164 (56.10%), Query Frame = -3 Query: 249 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGK 728 TGEDG +I E A L AIL K EG + GLGARD+LR EA L LYGN+M++ +TP+E G+ + + + + E F+G + ++KQ EG + VGF G P + + D G IG +T+G SP L K I + V+ K GT+ I+VR K Sbjct: 193 TGEDGFEIYCKPEDAKGLWHAILNAGKEEG-AQPIGLGARDTLRFEASLLLYGNEMDETITPLEVGMGFFV--KLKVEEDFIGKDALIKQKAEGVTRKLVGFELIDKGIPRHGYEVIKD--GKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKK 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CLOB6 (Aminomethyltransferase OS=Clostridium botulinum (strain 657 / Type Ba4) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 66/164 (40.24%), Postives = 92/164 (56.10%), Query Frame = -3 Query: 249 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGK 728 TGEDG +I E A L AIL K EG + GLGARD+LR EA L LYGN+M++ +TP+E G+ + + + + E F+G + ++KQ EG + VGF G P + + D G IG +T+G SP L K I + V+ K GT+ I+VR K Sbjct: 193 TGEDGFEIYCKPEDAKGLWHAILNAGKEEG-AQPIGLGARDTLRFEASLLLYGNEMDETITPLEVGMGFFV--KLKVEEDFIGKDALIKQKAEGVTRKLVGFELLDKGIPRHGYEVIKD--GKVIGHVTTGYKSPTLNKAIGLALVEEQYSKIGTEFNIKVRKK 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACV8 (Aminomethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 66/175 (37.71%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEG-GFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TG G ++ E + KAI E + ++ GLGARD+LRLE G CLYGND+ +P+EAGL W + EG F + KQ EG + + F G P + V+ + G IGE+TSG SP K I MGYV++ GT++ I+VRG+ + K PF Sbjct: 189 TGAGGFELYFYPEAGQAIWKAIFEAGAPEGIKPIGLGARDTLRLEMGFCLYGNDLSDTTSPLEAGLGWI---TKFVEGKNFTSRALLEKQKAEGLKRKLIAFEMVDRGIPRHGYELVNAD-GEKIGEVTSGTMSPMRKIGIGMGYVQTAYTALGTEIFIDVRGRKLKAVVVKAPF 359
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACLD (Aminomethyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.563e-21 Identity = 63/173 (36.42%), Postives = 91/173 (52.60%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I +E A + K +LE K G V GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+ + ++ F+G + Q + G + VG H QG GE+T+G SP LKKN+ + +K T V++E+R K I K PF Sbjct: 190 TGEDGFEIYCRNEDAACIWKLLLETGKDSGLV-PCGLGARDTLRFEAKLPLYGQELSKDITPIEAGIGFAVKTNKASD--FIGKAVLASQKEHGADRKLVGLEMIDKGIPRHGYAVYYQGEQAGEVTTGTQSPTLKKNVGLALLKKEACALDTVVEVEIRNKRLKAKIVKTPF 359
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_RALEJ (Aminomethyltransferase OS=Ralstonia eutropha (strain JMP134) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 67/175 (38.29%), Postives = 97/175 (55.43%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA--GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ VP+E A+ EK + VR GLGARD+LRLEAG+ LYG DM+ + +P++AGL W + ++E F G + G + +G G R+H KV G+ GEITSG FSP L ++IA + G+ G V++E+R + + K+PFV Sbjct: 205 TGEDGFELVVPAENVA----AVWEKLDAAGVRPAGLGARDTLRLEAGMNLYGQDMDINTSPLDAGLAWTVD--LQSERDFTGKAALAA---AGQRQQFLGLILRDKGGVLRAHQKVVTAAGD--GEITSGTFSPSLSQSIAFARLPMGV-AVGDTVQVEIRDRKLAATVVKLPFV 367
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PROMT (Aminomethyltransferase OS=Prochlorococcus marinus (strain NATL2A) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.249e-20 Identity = 61/173 (35.26%), Postives = 94/173 (54.34%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGE+G + E A + K+++ V GLGARD+LRLEA + LYGND+ TP EAGL W + F+G + + KQ + G + VG G + + +++ + +G +TSG +SP L+K IA+ YV S + K T++++E+R K + I K PF Sbjct: 202 TGEEGFEFLSSPETAKSIWKSLIASG---VTPCGLGARDTLRLEASMHLYGNDINLDTTPFEAGLGWLV--HLEMPNDFIGRKALEKQAEVGTQKKLVGIQVLDKGIARKGYPVLYNSE--TVGIVTSGTWSPTLQKPIALAYVPSEIAKVNTQIEVEIRRKKHPAIIVKRPF 367 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |