CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_NEIMA (Aminomethyltransferase OS=Neisseria meningitidis serogroup A GN=gcvT PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 2.200e-25 Identity = 69/173 (39.88%), Postives = 102/173 (58.96%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG+++ +P AV KA+ V+ GLGARD+LR+EAG+ LYGNDM+ +P+EAG+ W + + + F+G +L ++G V++VG G G R+H +V ++G GE TSG FSP LK++IA+ V G K+ +RGK D + K+PFV Sbjct: 194 TGEDGVEVILPGTEAVAFFKAL---QAAGVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESR-DFVGKAALLALKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGK--GETTSGVFSPSLKQSIAIARVPKDFD--GDTAKVLIRGKEADVRVLKLPFV 358
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THEP3 (Aminomethyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=gcvT PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.752e-25 Identity = 70/181 (38.67%), Postives = 104/181 (57.46%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKS-EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +I +P++ AV+L + I+E E ++ GLGARD+LR EAGL LYGN++ + +TP+EAG + + + +G F+G + +LKQ +EG + VGF G P + D Q IG +T+G FSP LKKNI + + S + G +++I +R K I F Y K Sbjct: 193 TGEDGFEIYMPNKYAVELWEKIIEVGKEYGLKPAGLGARDTLRFEAGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRADNQ--KIGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THEM4 (Aminomethyltransferase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=gcvT PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.752e-25 Identity = 69/172 (40.12%), Postives = 97/172 (56.40%), Query Frame = -3 Query: 216 TGEDGLKI-SVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I + + + + K +L + V GLGARD LRLEA L LYGNDM++ +TP+E G+ WA+ + E F+G E + +QL+EG R GF H + G IG +TSG FSP L + I M ++ G +K+G ++IE+R K I KMPF Sbjct: 189 TGEDGFEIYTTDKDGIIKIWKKLLNLN---VIPAGLGARDCLRLEASLLLYGNDMDETITPLEVGIKWAV----KFEKDFMGKEALKRQLEEGTSRRLKGFKIIDKGIARHGYKVFKDGKEIGYVTSGTFSPTLNQAIGMALIEKG-YKSGEIIEIEIRNKLVKAEIVKMPF 352
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PROM3 (Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvT PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.400e-25 Identity = 69/180 (38.33%), Postives = 101/180 (56.11%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG ++ + +E L + ++EG + GLG+RD+LRLEA + LYG DM+ + TP EAGL W + A F+G + +Q ++GP R VG G H N +GEITSG +SP L + IA+GY+ + L + G +V +E+RGK + + K PF Y +PS Sbjct: 202 TGEDGFELLLEAEAGRALWLQL--RAEGVI-PCGLGSRDTLRLEAAMHLYGQDMDINTTPFEAGLGWLVHLEMPAP--FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLHNNNKVGEITSGTWSPSLGEAIALGYLPTALARIGNEVAVEIRGKHHPATVVKRPF----YRRPS 372
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THEPX (Aminomethyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=gcvT PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25 Identity = 69/182 (37.91%), Postives = 107/182 (58.79%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKS-EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +I +P++ AV+L + I+E E ++ GLGARD+LR EAGL LYGN++ + +TP+EAG + + + +G F+G + +LKQ +EG + VGF G P + + H+++ IG +T+G FSP LKKNI + + S + G +++I +R K I F Y K Sbjct: 193 TGEDGFEIYMPNKYAVELWEKIVEVGKEYGLKPAGLGARDTLRFEAGLPLYGNELSEEITPLEAGFEFFV---KFDKGNFIGKDALLKQKEEGLKRKIVGFEMIDNGIPRHGYEVRAHNQK---IGYVTTGYFSPTLKKNIGLALIDSKYAQLGNQIEIVIRNKPLKALIISKNFYKKNYKK 368
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ANASP (Aminomethyltransferase OS=Anabaena sp. (strain PCC 7120) GN=gcvT PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25 Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I V E V+L +++ + V GLGARD+LRLEA + LYG D++ + TP+EAGL W + +G F+G + +Q G R +G G H G +G +TSG SP L +A+ YV S L K G +++E+RGKAY + K PF Sbjct: 204 TGEDGFEILVDPEVGVELWRSLYDAG---VIPCGLGARDTLRLEAAMALYGQDIDDNTTPLEAGLGWLV--HLDTKGDFIGRSVLEQQKATGVQRRLIGLQTQGRNIARHGYQVLSDGKVVGGVTSGTLSPTLGYPVALAYVPSKLAKVGQPLEVEIRGKAYPAVVVKRPF 369
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SYNS9 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9902) GN=gcvT PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24 Identity = 65/171 (38.01%), Postives = 92/171 (53.80%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ + +E L +LEK V GLGARD+LRLEA + LYG DM P EAGL W + A+ F+G + + + + GP R VG G H G P+G +TSG +SP L++ IA+ + + L K GT + +E+RGKA + + PF Sbjct: 196 TGEDGAELLLTAEDGQLLWSQLLEKG---VAPCGLGARDTLRLEAAMHLYGQDMNADTNPFEAGLGWLVHLEMPAD--FIGRQALERAAETGPNKRLVGLKLEGRAIARHDYPVLHNGEPVGVVTSGTWSPTLEEPIALASIPTALAKLGTNLSVEIRGKAQPATVVRRPF 361
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_NEIMB (Aminomethyltransferase OS=Neisseria meningitidis serogroup B GN=gcvT PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24 Identity = 68/173 (39.31%), Postives = 102/173 (58.96%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG-FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG+++ +P AV KA+ + V+ GLGARD+LR+EAG+ LYGNDM+ +P+EAG+ W + + + F+G +L ++G V++VG G R+H +V ++G GE TSG FSP LK++IA+ V G K+ +RGK D + K+PFV Sbjct: 194 TGEDGVEVILPGTEAVAFFKAL---QQAGVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESR-DFVGKAALLALKEKGVAVKQVGLLLEKGGILRAHMEVLTDKGQ--GETTSGVFSPSLKQSIAIARVPKDFD--GDTAKVLMRGKEVDVRVLKLPFV 358
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_GEOKA (Aminomethyltransferase OS=Geobacillus kaustophilus GN=gcvT PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24 Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ +E A L +AIL + V GLGARD+LR EA L LYG ++ ++PVEAGL +A+ + E F+G + +Q +EGPP R VG H + G +G +T+G SP LKKNI + VK+ + G +V++++RGK NI +PF Sbjct: 190 TGEDGFELYCKAEDAAALWEAILAAGARDSVLPCGLGARDTLRFEACLPLYGQELSDSISPVEAGLGFAV--KTEKETPFIGQAVLKRQKEEGPPRRLVGIEMIDRGIPRHGYLVFADGEEVGFVTTGTQSPTLKKNIGLALVKADVAAIGREVEVDIRGKRLKANIVPIPF 359
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ALCBS (Aminomethyltransferase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=gcvT PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24 Identity = 72/172 (41.86%), Postives = 98/172 (56.98%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG++I +P+ A+ L + +LE V GLGARD+LRLEAGL LYGNDM++ +TP EA + W + R F+G + +L Q + G + G R+H KV G GEITSG FSP L K+IA+ + +G A KV +E+R K + K PFV Sbjct: 188 TGEDGVEIMLPNADALTLWEQLLEAG---VSPIGLGARDTLRLEAGLNLYGNDMDESITPWEANMGWTVMLNDRE---FIGRQPLLNQKENGHSEQVGLILEGKGVLRAHQKVLMPNGEE-GEITSGTFSPTLGKSIALARLPAG---ATGKVDVEIRNKRQVAQVVKPPFV 349 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |