CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECO55 (Aminomethyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18 Identity = 64/179 (35.75%), Postives = 95/179 (53.07%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIA-WEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECO24 (Aminomethyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18 Identity = 64/179 (35.75%), Postives = 95/179 (53.07%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIA-WEPADRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_AQUAE (Aminomethyltransferase OS=Aquifex aeolicus GN=gcvT PE=3 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18 Identity = 62/174 (35.63%), Postives = 95/174 (54.60%), Query Frame = -3 Query: 207 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPT 728 TGEDG +I V E +L +++ + + GLGARD LR+EAGL LYGN++ + +TP+E L + + F+G E +LK+ + + + G P + + ++ IG I+SG +SP L K IA+ +V K G +V+IEVRG+ G + K PFV T Sbjct: 181 TGEDGFEIYVSPEEGKELFLELVKLA----KPCGLGARDVLRIEAGLPLYGNELSEEITPIEVNLEKFVDFSKE----FIGKEAMLKKKVK-KKLFGLELTEKGIPRKGYRVFKGDR--EIGWISSGTYSPTLNKGIALCFVDIEERKEGNEVEIEVRGRRVRGVLRKYPFVRT 343
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ALTMD (Aminomethyltransferase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18 Identity = 68/173 (39.31%), Postives = 92/173 (53.18%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP+E+A +A+L+ V+ GLGARD+LRLEAG+ LYG DM++ V+P+ A + W I AE F+G + + Q + G + VG H KV E G G ITSG FSP L +IAM V G V++E+R K + K FV Sbjct: 190 TGEAGYEIMVPAEQAESFWQALLDAG---VKPCGLGARDTLRLEAGMNLYGQDMDETVSPLAANMGWTI-TWEPAERDFVGRKALEAQREAGTD-KLVGLVMTEKGVLRHGLKVKTESGE--GVITSGTFSPTLGHSIAMARVP---RDVGETVEVEMRKKWVTVKVVKPSFV 352
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FLAPJ (Aminomethyltransferase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18 Identity = 57/173 (32.95%), Postives = 84/173 (48.55%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEG-KVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TG G +I +E A + I E + ++ GL ARD+LRLE G CLYGND+ +P+EAGL W + + F + + KQ +EG + V F H ++ D GN IG +TSG SP + I +GYV + + + I +R + K+PF Sbjct: 189 TGSGGFEIYFKNEDAEAIWNKIFEAGKPFGIKPIGLAARDTLRLEMGFCLYGNDINDTTSPLEAGLGWI----TKFDKEFTNSANLKKQKEEGVARKLVAFEMQERAVPRHDYEIVDASGNVIGIVTSGTMSPSMNIGIGLGYVPTSFSTVDSDIFIRIRKNDVLAKVVKLPF 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ALKOO (Aminomethyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=gcvT PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18 Identity = 60/175 (34.29%), Postives = 98/175 (56.00%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I V +++ L I+E + + ++ GLGARD+LR EA L LYG+++++ ++P+EAGL + + + F+G + +++Q +EG + VGF G P + + KV D+ IG +T+G SP LKKNI + + GT + I+VR K + F Sbjct: 193 TGEDGFEIYVDNDKVDALWDKIIEVGKDRGLKPAGLGARDTLRFEATLPLYGHEIDKDISPLEAGLGFFVKLNKE---NFIGKDALVRQKEEGLKRKVVGFEMKENGIPRQGYEVKVGDK---VIGVVTTGYNSPTLKKNIGYALIDAEYAALGTPIDIQVRKKTLKAEVVSKKF 361
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SALAR (Aminomethyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18 Identity = 63/179 (35.20%), Postives = 96/179 (53.63%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I + F+G E + Q ++G + G P R D QGN G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIAMPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDEGISPLAANMGWTIA-WEPTDRDFIGREALEMQREKGHEQLVGLVMTEKGVLRNELPVR----FTDAQGNQQEGIITSGTFSPTLGYSIALARVPAGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PSEA6 (Aminomethyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18 Identity = 64/172 (37.21%), Postives = 91/172 (52.91%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP+E+A D + +L+ V GLGARD+LRLEAG+ LYG DM++ ++P+ A + W I AE F+G + + Q G + VG H + +G G ITSG FSP L +IAM V + + G ++E+R K N+ K FV Sbjct: 190 TGEAGYEIMVPNEQAADFWQKLLDAG---VAPCGLGARDTLRLEAGMNLYGQDMDETISPLAANMGWTI-TWEPAERNFVGRKALEAQKAAGTD-KLVGLVLTEKGVLRHGQAVQVEGGE-GIITSGTFSPTLGHSIAMARVPASV---GDTAQVEMRKKWVTVNVVKPSFV 352
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PHOLL (Aminomethyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=gcvT PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.577e-18 Identity = 62/179 (34.64%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G ++++P E+A D + +L V+ GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I + + F+G E + KQ +EG +R G GG DE G G ITSG FSP L +IA+ V G+ G + +++R + + K FV Sbjct: 190 TGEAGYEVALPKEQAADFWQKLLSVG---VKPAGLGARDTLRLEAGMNLYGQEMDETISPLVANMGWTIAWKPE-DRQFIGREALEKQREEGTEQLVGLVMREKGVLRGGLAV----SFTDEMGTLHSGVITSGTFSPTLGFSIALARVPQGI---GEQAVVQIRNREMPVQVVKPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERE8 (Aminomethyltransferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 61/175 (34.86%), Postives = 93/175 (53.14%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ER V+ + +L V+ GLGARD+LRLEAG+ LYG +M++ V+P+ A + W + + F+G E + +Q G R+ VH D+ GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKERVVEFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTVAWLPE-DRQFIGREALEQQRANGTEQLVGLIMTEKGVLRNELPVHFSDDSGNQHVGVITSGSFSPTLGFSIALARVPAGI---GENAVVQIRNREMPVRVTKPGFV 357 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |