CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHIFL (Aminomethyltransferase OS=Shigella flexneri GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I + F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIA-WEPTDRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHIF8 (Aminomethyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I + F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIA-WEPTDRDFIGREALEVQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MOOTA (Aminomethyltransferase OS=Moorella thermoacetica (strain ATCC 39073) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 60/174 (34.48%), Postives = 92/174 (52.87%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKS-EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ + A + + IL E + GLGARD+LRLEA L LYG+++ ++P+EAGL + R +G F G E + Q + G + VG G P + + G IG +TSG +P L +NIA+ V +G G +V++ +RG+ + K+PF Sbjct: 192 TGEDGFELYFEAAAAPTMWRNILAAGREAGLVPAGLGARDTLRLEAALPLYGHELGPDISPLEAGLHRFV---RLEKGEFNGREALAAQREAGVRRQLVGLTMIDRGIPRPEYPVL--AAGKEIGYVTSGSLAPTLGQNIALALVAAGTVSTGGEVEVSIRGRVNRARVVKLPF 360
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LYSSC (Aminomethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 60/181 (33.15%), Postives = 92/181 (50.83%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG ++ E L IL+ + K V GLG RD+LR EAGL LYG ++ ++P+EAG+ +A+ + F+G + ++ Q + G P + VG H + G IGE+T+G P K+N+ + S G +++IE+RGK K+ V T +YK S Sbjct: 194 TGEDGFELYGAPEDIKALWGKILDAGQDKGVVPAGLGCRDTLRFEAGLPLYGQELSATISPLEAGIGFAVKLNKE---DFIGHDALVAQKENGLPRKLVGIEMIDKGIPRHGYKVFKDGKEIGEVTTGTQLPSSKRNVGHALIDSQFATIGNEMEIEIRGKQ-----LKVVTVETPFYKRS 366
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ENT38 (Aminomethyltransferase OS=Enterobacter sp. (strain 638) GN=gcvT PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.293e-17 Identity = 64/179 (35.75%), Postives = 96/179 (53.63%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A + A++E V+ GLGARD+LRLEAG+ LY +M++ V+P+ A + W I A+ F+G E + Q ++G + G P R DE GN G ITSG FSP L +IA+ V +G+ G +++R + N+TK FV Sbjct: 190 TGEAGYEIAMPNEKAAEFWHALVEAG---VKPAGLGARDTLRLEAGMNLYSQEMDETVSPLAANMGWTIA-WEPADREFIGREALEMQREKGTDQLVGLVMTEKGVLRNELPVR----FTDELGNQREGMITSGTFSPTLGYSIALARVPAGI---GETAIVQIRNREMPVNVTKPIFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ESCF3 (Aminomethyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECOUT (Aminomethyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECOL6 (Aminomethyltransferase OS=Escherichia coli O6 GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECO7I (Aminomethyltransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECO45 (Aminomethyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |