CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECO27 (Aminomethyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ACIC5 (Aminomethyltransferase OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 64/183 (34.97%), Postives = 100/183 (54.64%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVD--LAKAILEKS-EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRR-VGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +I +PS+ A + +LE E + GLGAR++LRLE+ + LYG+++ Q + EAGL + +G F+G+E + + + +G P R+ VG AR +V ++ +G +TSG +P LKKNIA+ YV + L +V +E+R N K VPT +Y+ Sbjct: 198 TGEDGFEIYIPSDEATSERVWNEVLEAGKEFGIVPCGLGARNTLRLESAMALYGHEISQDIDVFEAGLDRYC---KLDKGTFVGSEALKQVVAQGGPKRKLVGLEMIDRGIARDGYRVLNDTQQAVGYVTSGSPAPFLKKNIALAYVPTELATLDREVFVEIR-----NNPVKARIVPTPFYR 372
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHIDS (Aminomethyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDVQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_NATTJ (Aminomethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17 Identity = 57/174 (32.76%), Postives = 93/174 (53.45%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGE+G +I + +E L + I + E ++ GLGARD LR E L LYGN++ +TP+EA L + + + FLG + ++ Q ++G VGF G P ++ + D G IG ++SG SP L K + +G++K + G ++++++R K I K PF Sbjct: 192 TGENGFEIYIKAEETAKLWEKIEDAGENDGLKPIGLGARDVLRFEVCLPLYGNELSPEITPLEARLNPFVKLNKTED--FLGKDVLVNQKEQGLERVLVGFEMIDRGIPRTNYILMKD--GQEIGFVSSGSQSPTLDKALGLGFIKPEHDQEGNEIEVKIRKKTAKAKIVKTPF 361
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ECO81 (Aminomethyltransferase OS=Escherichia coli O81 (strain ED1a) GN=gcvT PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17 Identity = 63/179 (35.20%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A D +A++E V+ GLGARD+LRLEAG+ LY +M++ ++P+ A + W I A+ F+G E + Q + G + G P R D QGN G ITSG FSP L +IA+ V G+ G +++R + +TK FV Sbjct: 190 TGEVGYEIALPNEKAADFWRALVEAG---VKPCGLGARDTLRLEAGMNLYSQEMDETISPLAANMGWTIA-WEPADRDFIGREALEAQREHGTEKLVGLVMTEKGVLRNELPVR----FTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI---GETAIVQIRNREMPVKVTKPVFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THEGJ (Probable aminomethyltransferase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17 Identity = 63/177 (35.59%), Postives = 93/177 (52.54%), Query Frame = -3 Query: 198 ERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQ---------HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 692 E+A+ + + ILE+ E ++ GLGARD+LRLEAG LYGN+ ++ VTP++A L +AI + F+G E +LKQ + G + V F G P + + + G IGE+TSG SP L I + +VK K G ++++E+RGK PF K Y Sbjct: 222 EKALHVWERILEEGEKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLDFAIFWDKE----FIGKEALLKQKERGLGRKMVHFKMVDRGIPREGYKVLAN--GEVIGEVTSGTLSPLLGIGIGIAFVKEEYAKPGLEIEVEIRGKPKRAVTVSPPFYDPKKY 392
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_NOCFA (Aminomethyltransferase OS=Nocardia farcinica GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17 Identity = 58/177 (32.77%), Postives = 93/177 (52.54%), Query Frame = -3 Query: 204 TGEDGLKISVPSERAVDLAKAILEKSEGKV-RXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLH-KAGTKVKIEVRGKAYDGNITKMPFVPTK 728 TGE G ++ A + +A+LE+ + GLGARD+LR E G L+G+++ + ++PV+A WA+G R+ F G + ++ GP +G A + G P+GE TSG FSP LK IA+ + +G + G +V ++VRG+ + K PFVP++ Sbjct: 191 TGEHGYEVLPRWADAEPVFRALLEQVRAADGQPAGLGARDTLRTEMGYPLHGHELSREISPVQARTGWAVGWRKPQ---FWGKAALEQEKAAGPRRILMGLKAIDRGVLRQGQPVLRDGEPVGETTSGTFSPTLKVGIALALLDTGAGLEPGAEVAVDVRGRRLRCEVVKPPFVPSR 364
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CORJK (Aminomethyltransferase OS=Corynebacterium jeikeium (strain K411) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.879e-17 Identity = 60/179 (33.52%), Postives = 96/179 (53.63%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDL-AKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA-GGPPARSHSKVHDEQG-NPIGEITSGGFSPCLKKNIAMGY-----VKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ V ++ A + KA+ + ++ GL RD+LRLEAG+ LYGN++ +TPV+AGL I +++ F+G + I+ ++G +G G AR +V G IG +TSG SP L +A+ Y V SG G V++++RGK ++ + +PF Sbjct: 208 TGEDGFELIVANDGAETVWTKAMDQAAQLGGLPCGLACRDTLRLEAGMPLYGNELSLKLTPVDAGL--GILAATKSKDSFVGRDAIVSAKEKGTQQVLIGLAGEGRRAARGGYEVFAGDGEKAIGAVTSGALSPTLGHPVALAYVAKSAVSSGAAAEGATVEVDIRGKRFEYKVVALPF 384
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_STRCO (Aminomethyltransferase OS=Streptomyces coelicolor GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17 Identity = 63/176 (35.80%), Postives = 88/176 (50.00%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEG---PPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTK-VKIEVRGKAYDGNITKMPF 728 TGEDG ++ V E AV L +A+ E + GL RD+LRLEAG+ LYGN++ +TP +AGL + + EG F+G + + + PP VG A G G IGE+TSG SP L + IAM YV GT+ V +++RG + +PF Sbjct: 194 TGEDGFELFVKPEHAVGLWQALTGAGEAAGLIPCGLSCRDTLRLEAGMPLYGNELSTALTPFDAGLGRVV--KFEKEGDFVGRAALTEAAERAASRPPRVLVGLVAEGRRVPRSGYRVVAGGEVIGEVTSGAPSPTLGRPIAMAYVDPAHAAPGTEGVGVDIRGSHEPYEVVALPF 367
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ENTS8 (Aminomethyltransferase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.761e-17 Identity = 62/179 (34.64%), Postives = 95/179 (53.07%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+A ++E V+ GLGARD+LRLEAG+ LYG +M++ V+P+ A + W I + + F+G + + Q + G + G G P R D+QGN G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIAMPNEKAAGFWSQLVEAG---VKPCGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWQPE-DRAFIGRDALEAQRENGTEQLVGLVMTEKGVLRGELPVR----FTDDQGNAREGIITSGTFSPTLGYSIALARVPAGI---GDTAIVQIRNREMPVKVTKPIFV 357 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |