CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THESQ (Aminomethyltransferase OS=Thermotoga sp. (strain RQ2) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 60/174 (34.48%), Postives = 87/174 (50.00%), Query Frame = -3 Query: 216 TGEDGLKISVP---SERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ + S + D +L K +G R GLGARD RLEA LYG DM+++ P E GL+W + + + F+G E +LK ++ +G AR +V + G +GEITSG FSP L K+IA+ V + + GK + + K PF Sbjct: 189 TGEDGFELMIEAKNSPKVWDALMNLLRKIDG--RPAGLGARDVCRLEATYLLYGQDMDENTNPFEVGLSWVV----KLDKDFVGKEALLKAKEKVERKLVALELSGKRIARKGYEV-SKNGERVGEITSGNFSPTLGKSIALALVSKSVKIGDQLGVVFPGGKLVEALVVKKPF 355
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THEP1 (Aminomethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 62/175 (35.43%), Postives = 93/175 (53.14%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAV---DLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEV-RGKAYDGNITKMPF 728 TGEDG ++ + ++ A D +L K +G R GLGARD RLEA LYG DM++ P+E GL+W + + + F+G E +LK ++ +G AR +V + G +GEITSG FSP L K+IA+ V + K G ++++ GK + + K PF Sbjct: 189 TGEDGFELMLEAKDAPKVWDALMNLLRKIDG--RPAGLGARDVCRLEATYLLYGQDMDESTNPLEVGLSWVV----KLDKDFVGKEALLKAKEKVERKLVALELSGKRIARKGYEVL-KNGERVGEITSGNFSPTLGKSIALALVSKSV-KVGDQLEVAFPGGKLVEALVVKKPF 355
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PYRHO (Probable aminomethyltransferase OS=Pyrococcus horikoshii GN=gcvT PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 69/205 (33.66%), Postives = 103/205 (50.24%), Query Frame = -3 Query: 198 TGEDGLKISVPS--------------ERAVDLAKAILEKSEGK---VRXTGLGARDSLRLEAGLCLYGNDMEQ---------HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGE+G ++ + E+A+ + + ILE EGK ++ GLGARD+LRLEAG LYGN+ ++ VTP++A L +AI + F+G + +LKQ + G + V F G P + KV+ G IGE+TSG SP L I + +VK K G ++++E+RG+ PF K Y Sbjct: 196 TGENGFEVYIEDANPYHPDESKRGEPEKALHVWERILE--EGKKYGIKPCGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEFAI----YWDKDFIGKDALLKQKERGVGRKLVHFKMIDKGIPREGY-KVY-ANGEMIGEVTSGTLSPLLNVGIGIAFVKEEYAKPGIEIEVEIRGQRKKAVTVTPPFYDPKKY 392
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRATW (Aminomethyltransferase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + L + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRATO (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + L + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRATM (Aminomethyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + L + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRATH (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + L + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRATF (Aminomethyltransferase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=gcvT PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + L + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_IDILO (Aminomethyltransferase OS=Idiomarina loihiensis GN=gcvT PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17 Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSH-SKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP+E+ L +L+ V GLGARD+LRLEAG+ LYG DM++++TP+EA + W++ A+ F+G + + ++ EG + VG H KV E G G ITSG FSP L ++AM V S + G ++E+R K + K FV Sbjct: 190 TGEKGYEIVVPAEQLEALWNDLLKAD---VAPCGLGARDTLRLEAGMNLYGQDMDENITPLEANMGWSVA-FEPADRDFIGRKALEQKKAEGHD-KLVGLVMEEKGVLRHGQKVTVEGGE--GIITSGTFSPTLGFSVAMARVPSSV---GDTAEVEMRKKQMPVKVVKPGFV 352
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRATN (Aminomethyltransferase OS=Francisella tularensis subsp. novicida (strain U112) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.378e-17 Identity = 58/172 (33.72%), Postives = 83/172 (48.26%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + L + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPTTQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDISTTPLERGLGWSVDLSDE-HRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |