CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ERWCT (Aminomethyltransferase OS=Erwinia carotovora subsp. atroseptica GN=gcvT PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16 Identity = 58/175 (33.14%), Postives = 94/175 (53.71%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPI---GEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+ VD + +L V+ GLGARD+LRLEAG+ LYG DM++ ++P+ A + W I + + F+G E ++ Q ++G R+ V + + G ITSG FSP L +IA+ V +G+ G + +++R + +TK FV Sbjct: 195 TGEAGYEIALPNEQVVDFWQQLLAVG---VKPCGLGARDTLRLEAGMNLYGQDMDEGISPLAANMGWTIAWQPE-DRQFIGREALVHQREKGTEQLVGLVLTEKGVLRNDLSVRFTDSDGVMREGVITSGSFSPTLGVSIALARVPAGI---GEQAIVQIRNRELPVRVTKPGFV 362
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CELJU (Aminomethyltransferase OS=Cellvibrio japonicus (strain Ueda107) GN=gcvT PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16 Identity = 60/175 (34.29%), Postives = 93/175 (53.14%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGY--VKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDGL+I +P+E+A +A+ + V GLGARD+LRLEAG+ LYG++M+++++P+ A + W I + A F+G + + G + VG R+ VH + G ITSG FSP L +IA+ V G + ++E+RGK ++ FV Sbjct: 194 TGEDGLEIMLPNEQAGTFWQAL---AAAGVAPCGLGARDTLRLEAGMNLYGHEMDENISPLAANMGWTIAWQPEAR-NFIGRAALTAEKSAGQRHKLVGLVLRERGVLRAEQLVHIANSDERGVITSGTFSPSLGYSIALARVPVTQVPLTPGAQCQVEMRGKLVTVDVVAPGFV 364
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BDEBA (Aminomethyltransferase OS=Bdellovibrio bacteriovorus GN=gcvT PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.094e-16 Identity = 57/175 (32.57%), Postives = 89/175 (50.86%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G ++ V + DL +LEK + GLGARD+LR E LYG++++ P EAGL W I + A+ F+ +I+ + + G VGF G P + +S + IG++TSG SP L + I + ++ K GT+ +++RG+ + K PFV Sbjct: 188 TGEKGCEVFVEAAGTADLWMTLLEKGKDLGCMGIGLGARDTLRTEMKYSLYGHEIDDTTNPYEAGLGWVI---KPAKKDFMNKAQIVGKKEAGLTRNLVGFKMLEKGIPRQGYS-LFSFDNKEIGKVTSGTHSPTLDEPIGIAFIDVAYAKEGTEFLLDIRGRKVKAVVCKTPFV 358
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SERP5 (Aminomethyltransferase OS=Serratia proteamaculans (strain 568) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 63/179 (35.20%), Postives = 93/179 (51.96%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P E+ VD + +L V+ GLGARD+LRLEAG+ LYG +M++ V+P+ A + W I + F+G E + KQ + G + G P R DE G G ITSG FSP L +IA+ V +G+ G + +++R + +TK FV Sbjct: 190 TGEAGYEIALPKEQVVDFWQKLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEGVSPLAANMGWTIAWLPE-DRQFIGREALEKQREMGTEQLVGLIMTEKGVLRNELPVR----FTDEAGQTHEGIITSGSFSPTLGFSIALARVPAGI---GEQAIVQIRNREMPVKVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PYRFU (Probable aminomethyltransferase OS=Pyrococcus furiosus GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 66/202 (32.67%), Postives = 100/202 (49.50%), Query Frame = -3 Query: 198 TGEDGLKISVPS--------------ERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQ---------HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGE+G ++ + E+A+ + + ILE+ + ++ GLGARD+LRLEAG LYGND ++ VTP++A L +AI + F+G + +LKQ ++G + V F R KV+ G IGE+TSG SP L I + +VK K G +++I++RG PF K Y Sbjct: 196 TGENGFEVYIEDLNPYHPDEEKRGKPEKALHVWERILEEGQKYGIKPAGLGARDTLRLEAGYTLYGNDTKELQLLSTDIDEVTPLQANLEFAI----YWDKDFIGKDALLKQKEKGLGRKLVHFKMLEKSVPREGYKVY-ANGELIGEVTSGTLSPLLNIGIGIAFVKEEYAKPGVEIEIDIRGTRKKAITVTPPFYDPKKY 392
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PYRAB (Probable aminomethyltransferase OS=Pyrococcus abyssi GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 69/205 (33.66%), Postives = 102/205 (49.76%), Query Frame = -3 Query: 198 TGEDGLKISVPS--------------ERAVDLAKAILEKSEGK---VRXTGLGARDSLRLEAGLCLYGNDMEQ---------HVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYY 728 TGE+G ++ + E+A+ + + ILE EGK ++ GLGARD+LRLEAG LYGN+ ++ VTP++A L +AI + F+G + +LKQ + G + V F G P + KV+ G IGE+TSG SP L I + +VK K G ++++E+RG PF K Y Sbjct: 196 TGENGFEVYIEDANPYHPDESKRGEPEKALHVWERILE--EGKKYGIKPAGLGARDTLRLEAGYTLYGNETKELQLLSTDIDEVTPLQANLEFAI----YWDKDFIGKDALLKQKERGLGRKLVHFKMVDKGIPREGY-KVY-ANGELIGEVTSGTLSPLLNVGIGIAFVKEEYAKPGIEIEVEIRGARKKAITVTPPFYDPKKY 392
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRATT (Aminomethyltransferase OS=Francisella tularensis subsp. tularensis GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYFAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRAT1 (Aminomethyltransferase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+ + ++LE + GLGARD+LRLEAG+ LYG DM+ TP+E GL W++ F+G + + +G + VG + D G ITSG FSP LK I + YV K + +RGK + + K FV Sbjct: 188 TGEDGFEVILPATQVKKFWDSLLENG---AQPAGLGARDTLRLEAGMHLYGADMDTSTTPLERGLGWSVDLSDE-HRDFIGKKAYFAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVP----KQADNPVVNIRGKELEVELVKPKFV 351
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THEMA (Aminomethyltransferase OS=Thermotoga maritima GN=gcvT PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16 Identity = 60/174 (34.48%), Postives = 87/174 (50.00%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAV---DLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ + ++ A D +L K +G R GLGARD RLEA LYG DM+++ P E GL+W + + F+G E +LK ++ +G AR +V + G +GEITSG FSP L K+IA+ V + + GK + + K PF Sbjct: 189 TGEDGFELMLEAKNAPKVWDALMNLLRKIDG--RPAGLGARDVCRLEATYLLYGQDMDENTNPFEVGLSWVV----KLNKDFVGKEALLKAKEKVERKLVALELSGKRIARKGYEVL-KNGERVGEITSGNFSPTLGKSIALALVSKSVKIGDQLGVVFPGGKLVEALVVKKPF 355
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PECCP (Aminomethyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16 Identity = 61/179 (34.08%), Postives = 94/179 (52.51%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPP------VRRVGFFAGGPPARSHSKVHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+E+ VD + +L V+ GLGARD+LRLEAG+ LYG DM++ ++P+ A + W I + + F+G E + Q ++G + G P R D G G ITSG FSP L +IA+ V G+ G + +++R + ++TK FV Sbjct: 195 TGEAGYEIALPNEQVVDFWQQLLAAG---VKPCGLGARDTLRLEAGMNLYGQDMDEGISPLAANMGWTIAWQPE-DRQFIGREALTHQREKGTDQLVGLVLTEKGVLRNDLPVR----FTDSDGVMREGVITSGSFSPTLGVSIALARVPLGI---GEQAIVQIRNRELPVHVTKPGFV 362 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |