CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEPBP (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16 Identity = 57/163 (34.97%), Postives = 90/163 (55.21%), Query Frame = -3 Query: 249 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA-RSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGK 728 TGEDG +I + V L K +LE K G V GLGARD+LRLEA LYG+++ TPVE+G+ + + ++ + +LG ++I+ GP + VG P R + + G IG+ TSG SP K+++ + +++ K T+V +E+RG+ Sbjct: 192 TGEDGFEIYTSNALGVTLWKELLEIGKDFGLV-PVGLGARDTLRLEAKYPLYGHELNAEWTPVESGINFIVKEKSKP---YLGYDRIIADKKNGPKSKVVGVRLLEPGVLRENFPIFAADGKEIGKTTSGTHSPSRKESLGLAILQTEFAKNQTEVFVEIRGQ 350
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEPBA (Aminomethyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=gcvT PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16 Identity = 57/163 (34.97%), Postives = 90/163 (55.21%), Query Frame = -3 Query: 249 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA-RSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGK 728 TGEDG +I + V L K +LE K G V GLGARD+LRLEA LYG+++ TPVE+G+ + + ++ + +LG ++I+ GP + VG P R + + G IG+ TSG SP K+++ + +++ K T+V +E+RG+ Sbjct: 192 TGEDGFEIYTSNALGVTLWKELLEIGKDFGLV-PVGLGARDTLRLEAKYPLYGHELNAEWTPVESGINFIVKEKSKP---YLGYDRIIADKKNGPKSKVVGVRLLEPGVLRENFPIFAADGKEIGKTTSGTHSPSRKESLGLAILQTEFAKNQTEVFVEIRGQ 350
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SODGM (Aminomethyltransferase OS=Sodalis glossinidius (strain morsitans) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.438e-16 Identity = 63/176 (35.80%), Postives = 93/176 (52.84%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVH--DEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P+ +A D + +L V+ GLGARD+LRLEAG+ LYG +M++ ++P+ A + W I R F+G E + Q G + VG R+ VH D GN G ITSG FSP L +IA+ V +G+ G + + +R + +TK FV Sbjct: 190 TGEAGYEIALPATQAADFWRQLLAAG---VKPCGLGARDTLRLEAGMNLYGQEMDEGISPLAANMGWTITWRPEGR-DFIGREALEAQRAAGDGEQLVGLVMTEKGVLRNGLPVHFTDAAGNMQQGIITSGSFSPTLGVSIALARVPAGI---GQQAIVLIRNREMPVKVTKPGFV 358
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_TERTT (Aminomethyltransferase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 60/173 (34.68%), Postives = 89/173 (51.45%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG +I +P+E AV L + + V GLGARD+LRLEAG+ LYG++M+ +P+ A + W + AE F+G E + + G + VG + G R+ +V + +G ITSG FSP L +IA+ V G + + VR + + I FV Sbjct: 191 TGEDGYEIILPAEAAVQLWQDLARIG---VTPCGLGARDTLRLEAGMNLYGHEMDDDTSPLVANMAWTVA-WEPAERNFIGREALTAEKSAGISHKLVGLVYTGKGVLRAEQEVTAPGVDGVGVITSGTFSPTLGYSIALARVPVGF---TDQAVVNVRNRQLEVKIISPCFV 356
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_NATPD (Probable aminomethyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 58/174 (33.33%), Postives = 86/174 (49.43%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHV---TPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG+++ + A + A+ + GLGARD+LRLEAG L GN+ + TP EA + +A+ F+G++ + Q + GP R VG H G+ +GE+TSG SP L IA+GYV + GT++ + VRG D + +PF Sbjct: 193 TGEDGVELLFETAAAETVWSAL------DCQPCGLGARDTLRLEAGFLLGGNEFDPETNPRTPYEANIGFAVDLGTE----FVGSDALAAQREAGPDERLVGLRLQDRGIARHGHDIVAAGDVVGEVTSGTMSPTLGAAIALGYVPVEYTEPGTELAVVVRGDEKDAVVEALPF 356
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_HALHL (Aminomethyltransferase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 62/173 (35.84%), Postives = 90/173 (52.02%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA-GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ +P+++A L + +E + GLGARDSLRLEAGL L G++M++ TP+EA L W + + F+G + +Q G R +G G PAR V + G+ G ITSG SP L IA+ V +G A ++ +R + K PFV Sbjct: 190 TGEDGFELILPADQAPALWDRL---TEAGAQPCGLGARDSLRLEAGLNLNGHEMDEETTPLEAALGWTVAWDPE-DRDFIGRAALEEQRRHGAAWRLIGLLVEGRAPAREGYVVRTDAGD--GVITSGAHSPTLGGPIALARVPAG---AEGDWRVVIRKREAAARRVKPPFV 353
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SACEN (Aminomethyltransferase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=gcvT PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.158e-16 Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ A + +A+ + +E +R GL RD+LRLEAG+ LYGN++ +TP A L + + G F+G + ++ + VG A H +V D G IG +TSG SP L IAM YV + GT +++++RG A + +PF Sbjct: 192 TGEDGFELFTSPADAPAVWQALADSGAEHGLRPAGLSCRDTLRLEAGMPLYGNELSAELTPFHANLGRVV--KLDKPGDFVGKAPLAAAAEKPTERKLVGLRTDQRRAPRHGYRVLDAGGAEIGVVTSGAPSPTLGHPIAMAYVDRDHAEPGTALQVDIRGTAVPVEVVALPF 362
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_STRAW (Aminomethyltransferase OS=Streptomyces avermitilis GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16 Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQ---LDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTK-VKIEVRGKAYDGNITKMPF 728 TGEDG ++ V A L +A+ E + + GL RD+LRLEAG+ LYG+++ +TP +AGL + + EG F+G E + + ++ PP VG A G G IGE+TSG SP L + IAM YV + GT V +++RG + +PF Sbjct: 194 TGEDGFELFVDPADAEKLWQALTEAGAPAGLVPCGLSCRDTLRLEAGMPLYGHELSTSLTPFDAGLGRVV--KFEKEGDFVGREALTEAAALAEKNPPRVLVGLIAEGRRVPRAGYPVVVGGEVIGEVTSGAPSPTLGRPIAMAYVDAAHAAPGTAGVGVDIRGSHEPYEVVALPF 367
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_EXIS2 (Aminomethyltransferase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.430e-16 Identity = 58/171 (33.92%), Postives = 90/171 (52.63%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ +PS A + A+LE V GLGARD+LR EA L LYG+++ ++P+EAG+ +A+ + ++ F+G+E ++KQ ++GP + +G G IG +T+G P + K IA+ V + T +IEVRGK PF Sbjct: 192 TGEDGFELYMPSADASAVWNALLEAD---VVPCGLGARDTLRFEACLPLYGHELSATISPIEAGMGFAVKPQVKS---FVGSEVLVKQKEDGPRRQLIGLELTDKGIARQDAPVLVNGETIGFVTTGTLPPTIGKAIALALVPTEYATEET-FEIEVRGKKLAAKRIDTPF 355
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MYCA1 (Aminomethyltransferase OS=Mycobacterium avium (strain 104) GN=gcvT PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.092e-16 Identity = 58/179 (32.40%), Postives = 90/179 (50.28%), Query Frame = -3 Query: 204 TGEDGLKISVPSERA---VDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLH-KAGTKVKIEVRGKAYDGNITKMPFVPTK 728 TGE G ++ P E A D A + ++ G+ GLGARD+LR E G L+G+++ ++P++A WAIG ++ A F G + +L + + GP G G P+G TSG FSP L+ IA+ + + + G KV ++VRG+A + + PFV K Sbjct: 192 TGEHGYELLPPWESAGVVFDALAAAVSQAGGQ--PAGLGARDTLRTEMGYPLHGHELSPDISPLQARCGWAIGWKKEA---FFGRDALLAEKEAGPRRLLRGLRMVGRGVLRAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALIDTDADVRDGQKVTVDVRGRAATCEVVRPPFVAVK 365 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |