CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MYCLE (Aminomethyltransferase OS=Mycobacterium leprae GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16 Identity = 56/177 (31.64%), Postives = 90/177 (50.85%), Query Frame = -3 Query: 204 TGEDGLKISVPSERAVDLAKAILEKS-EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKS-GLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 728 TGE G ++ P E A + A++ + + GLGARD+LR E G LYG+++ ++P++A WAIG ++ A FLG + +L + GP G G PIG TSG FSP L+ +A+ + S + G ++ ++VRG+A + + + PF+ K Sbjct: 192 TGEQGYELLPPWESADVVFDALVAAVVDARGEPAGLGARDTLRTEMGYPLYGHELSLDISPLQARCGWAIGWKKDA---FLGRDALLAEKAAGPRRLLRGLRMAGRGVLRPGLTVCAGDIPIGVTTSGTFSPTLQVGVALALIDSEAAVQDGQQIIVDVRGRAVECEVVRPPFIEVK 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MYCLB (Aminomethyltransferase OS=Mycobacterium leprae (strain Br4923) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16 Identity = 56/177 (31.64%), Postives = 90/177 (50.85%), Query Frame = -3 Query: 204 TGEDGLKISVPSERAVDLAKAILEKS-EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKS-GLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 728 TGE G ++ P E A + A++ + + GLGARD+LR E G LYG+++ ++P++A WAIG ++ A FLG + +L + GP G G PIG TSG FSP L+ +A+ + S + G ++ ++VRG+A + + + PF+ K Sbjct: 192 TGEQGYELLPPWESADVVFDALVAAVVDARGEPAGLGARDTLRTEMGYPLYGHELSLDISPLQARCGWAIGWKKDA---FLGRDALLAEKAAGPRRLLRGLRMAGRGVLRPGLTVCAGDIPIGVTTSGTFSPTLQVGVALALIDSEAAVQDGQQIIVDVRGRAVECEVVRPPFIEVK 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_FRASN (Aminomethyltransferase OS=Frankia sp. (strain EAN1pec) GN=gcvT PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16 Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXT-GLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG--GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G ++ AV L +L G GLGARD+LR E G L+G D+ ++PV+A WA+G + A F G E +L + GP G + G P R H +V G +GE+TSG FSP L++ I + + + AG +V ++VRG+ + + PFV Sbjct: 191 TGEAGFELLPRWADAVPLWDELLTVVTGLGGLPCGLGARDTLRTEMGYPLHGQDLSLSISPVQARSGWAVGWDKPA---FWGREALLAERAAGPARSLWGLRSNDRGIP-RPHMRVSGPDGAELGEVTSGTFSPTLRQGIGLALLDRSV-TAGDEVAVDVRGRVSTMTVVRPPFV 360
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MYCPA (Aminomethyltransferase OS=Mycobacterium paratuberculosis GN=gcvT PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15 Identity = 57/179 (31.84%), Postives = 90/179 (50.28%), Query Frame = -3 Query: 204 TGEDGLKISVPSERA---VDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLH-KAGTKVKIEVRGKAYDGNITKMPFVPTK 728 TGE G ++ P E A D A + ++ G+ GLGARD+LR E G L+G+++ ++P++A WAIG ++ A F G + +L + + GP G G P+G TSG FSP L+ IA+ + + + G +V ++VRG+A + + PFV K Sbjct: 192 TGEHGYELLPPWESAGVVFDALAAAVSQAGGQ--PAGLGARDTLRTEMGYPLHGHELSPDISPLQARCGWAIGWKKEA---FFGRDALLAEKEAGPRRLLRGLRMVGRGVLRAGLTVLVGDTPVGVTTSGTFSPTLQAGIALALINTDADVRDGQEVTVDVRGRAATCEVVRPPFVAVK 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHESH (Aminomethyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.695e-15 Identity = 65/185 (35.14%), Postives = 86/185 (46.49%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI----------GKRRRAEGGFLGAEKILKQLDEGPPVRRVG---FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP + A L + +LE V+ GLGARD+LRLEAG+ LYG DM++ V P+ A + W I G+ A G EK++ + E V R G FF G G ITSG FSP L +IAM V + G ++E+R K + FV Sbjct: 190 TGETGYEIIVPEDEAQALWQGLLEAG---VKPCGLGARDTLRLEAGMNLYGLDMDETVNPLAANMGWTIAWEPQDRDFNGREALAAIKAAGTEKLVGLIMEAKGVIRPGMSVFFTDGEGVEQQ-----------GTITSGTFSPTLGYSIAMARVPRSI---GDTAEVEMRKKRVSVKVVAPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_HALSA (Probable aminomethyltransferase OS=Halobacterium salinarium GN=gcvT PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15 Identity = 62/177 (35.03%), Postives = 87/177 (49.15%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDM---EQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG--GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G++I P+ D A A+ + + GLGARD+LR+E G L G D E TP EAG+ +A+ E GF+G + + + P + VG G P ++ V G+ IG +TSG SP L + I +GYV S GT V + +RG IT PF+ Sbjct: 196 TGEAGVEIVFPA----DGAGAVWDAIANDCQPCGLGARDTLRMEHGFLLSGQDFDPEENPRTPFEAGIGFAVAP----ESGFVGRDALADT--DSPEQQFVGLTLDERGVPRHGYA-VTTPAGDEIGTVTSGTMSPTLGEPIGLGYVDSAHAADGTTVAVRIRGTDKQATITTPPFL 361
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_HALS3 (Probable aminomethyltransferase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=gcvT PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15 Identity = 62/177 (35.03%), Postives = 87/177 (49.15%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDM---EQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG--GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G++I P+ D A A+ + + GLGARD+LR+E G L G D E TP EAG+ +A+ E GF+G + + + P + VG G P ++ V G+ IG +TSG SP L + I +GYV S GT V + +RG IT PF+ Sbjct: 196 TGEAGVEIVFPA----DGAGAVWDAIANDCQPCGLGARDTLRMEHGFLLSGQDFDPEENPRTPFEAGIGFAVAP----ESGFVGRDALADT--DSPEQQFVGLTLDERGVPRHGYA-VTTPAGDEIGTVTSGTMSPTLGEPIGLGYVDSAHAADGTTVAVRIRGTDKQATITTPPFL 361
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PROMH (Aminomethyltransferase OS=Proteus mirabilis (strain HI4320) GN=gcvT PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 60/150 (40.00%), Postives = 84/150 (56.00%), Query Frame = -3 Query: 291 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPA-RSHSKVH--DEQGN-PIGEITSGGFSPCLKKNIAMGYVKSGL 728 TGE G +I++P E+AVD K +L V+ GLGARD+LRLEAG+ LYG +M++ + P+EA + W I + F+G E + K G + VG R+ S VH D+ G G ITSG FSP L +IA+ V +G+ Sbjct: 190 TGEAGYEIAMPKEQAVDYWKKLLAVG---VKPAGLGARDTLRLEAGMDLYGQEMDETINPLEANMGWTIAWLPE-DRQFIGREALEKLRATGTD-KLVGLVMREKGVLRAGSAVHFTDDLGELREGVITSGTFSPTLGFSIALARVPAGI 334
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ACIBL (Aminomethyltransferase OS=Acidobacteria bacterium (strain Ellin345) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15 Identity = 60/183 (32.79%), Postives = 91/183 (49.73%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVD---LAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 T EDG +I +PS+ A + + E V GLG+R++LRLE L LYG+++ + EAGL + + +G F+G + K ++G VG G P R KV D +G IG +TSG + P LK+N+A+ YV V +E+R + K VP+++YK Sbjct: 201 TAEDGFEIYIPSDAATSDRVWNELLQAGKEFGVVPAGLGSRNTLRLEGKLPLYGHEISDEINVWEAGLDRFL---KMDKGDFIGRAALEKAKNDGVKRALVGLETIERGIP-RDGYKVLDLEGKEIGYVTSGSYMPFLKRNLALAYVPVEQSALDNIVAVEIRNQP-----VKAKVVPSQFYK 374
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEFN (Aminomethyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 62/176 (35.23%), Postives = 87/176 (49.43%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKV---HDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L +A+L+ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W + +E F+G + L + + VG H D G G ITSG FSP L +IAM V SG+ G ++E+R K + + FV Sbjct: 190 TGEAGYEIIVPETEAEALWQALLDAG---VKPCGLGARDTLRLEAGMNLYGQDMDESINPLAANMGWTVA-WEPSERDFIGRD-ALTAIKAAGTDKLVGLVMEEKGVLRHDMAVFFTDADGVEHQGVITSGSFSPTLGYSIAMARVPSGI---GAIAEVEMRKKRVNVKVIAPSFV 357 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |