CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEDO (Aminomethyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 65/182 (35.71%), Postives = 91/182 (50.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWA----------IGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP + A DL +A+L V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W IG+ E G EK++ + E V R P + S ++Q G ITSG FSP L +IAM V +G+ G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEQDAEDLWQALLNTG---VKPCGLGARDTLRLEAGMNLYGLDMDESINPLAANMGWTIAWEPSDRDFIGRAALTELKAQGTEKLVGLVMEEKGVLRHDM----PVFFTDSDGVEQQ----GYITSGTFSPTLGYSIAMARVPAGI---GAIAEVEMRKKRVAVKVIAPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHELP (Aminomethyltransferase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14 Identity = 63/182 (34.62%), Postives = 90/182 (49.45%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWA----------IGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L +A+L+ V+ GLGARD+LRLEAG+ LYG DM++ V P+ A + W IG+ A G +K++ + E V R G P + + ++Q G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEAEAEALWQALLDNG---VKPCGLGARDTLRLEAGMNLYGQDMDESVNPLAANMGWTIAWEPEDRDFIGREALAAIKAAGTDKLVGLVMEAKGVLRTGM----PVFFTDADGVEQQ----GAITSGTFSPTLGYSIAMARVPNSV---GDVAEVEMRKKRVPVKVIAPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SACD2 (Aminomethyltransferase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14 Identity = 60/173 (34.68%), Postives = 85/173 (49.13%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG +I +P+ A +A++ V GLGARD+LRLEAG+ LYG++M+ + +P+ A + W I + E F+G E I + G + VG R+ V E G ITSG FSP L K++A+ V T + VR K + K FV Sbjct: 191 TGEDGYEIMLPTSDADAFWRALMAVG---VAPCGLGARDTLRLEAGMNLYGHEMDDNTSPLVANMAWTIAWQPE-ERNFIGREAISAEKAAGVTHKLVGLVLQDRGVLRAEQVVTCEGVEGEGVITSGTFSPTLSKSVALARVPVAFSGECT---VAVRNKQLKALVVKPSFV 356
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_MYCUA (Aminomethyltransferase OS=Mycobacterium ulcerans (strain Agy99) GN=gcvT PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.338e-14 Identity = 57/179 (31.84%), Postives = 88/179 (49.16%), Query Frame = -3 Query: 204 TGEDGLKISVPSERA---VDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLH-KAGTKVKIEVRGKAYDGNITKMPFVPTK 728 TGE G ++ P E A D A + + G GLGARD+LR E G L+G+++ ++P++A WAIG ++ A F G E +L + GP G G P+G TSG FSP L+ IA+ + + + G ++ ++VRG+A + + + PFV K Sbjct: 192 TGEHGYELLPPWESAGVVFDALAAAVAEVGGS--PAGLGARDTLRTEMGYPLHGHELSLDISPLQARCGWAIGWKKDA---FFGREALLAEKAAGPRRLPRGLRMVGRGVLRPGLTVLNGSTPVGVTTSGTFSPTLQIGIALALIDTDAGVEDGQQITVDVRGRAVECEVVRPPFVEAK 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPY (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPTGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPS (Aminomethyltransferase OS=Yersinia pseudotuberculosis GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPP (Aminomethyltransferase OS=Yersinia pestis (strain Pestoides F) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPN (Aminomethyltransferase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPG (Aminomethyltransferase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPE (Aminomethyltransferase OS=Yersinia pestis GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |