CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPB (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERPA (Aminomethyltransferase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_YERP3 (Aminomethyltransferase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 56/175 (32.00%), Postives = 91/175 (52.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVH--DEQGNP-IGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I++P ++ V + +L V+ GLGARD+LRLEAG+ LYG +M++ +P+ A + W + + + F+G + +Q +G R+ V+ D GN +G ITSG FSP L +IA+ V +G+ G +++R + +TK FV Sbjct: 190 TGEAGYEIALPKQQVVAFWQQLLAAG---VKPAGLGARDTLRLEAGMNLYGQEMDEKTSPLAANMGWTVAWQPE-DRQFIGRAALERQRMKGTEQLVGLIMTEKGVLRNELPVYFFDAAGNQHVGVITSGSFSPTLGFSIALARVPAGI---GEHAVVQIRNREMPVRVTKPGFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_DEIDV (Aminomethyltransferase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14 Identity = 55/171 (32.16%), Postives = 85/171 (49.71%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ + + A + ++ V GLGARD+LRLEAG LYG++ + P+ + TW + + F G E + + + + +G P R V + G +G +TSG SP L IA+ V++G A T ++EVRGKA+ T +PF Sbjct: 197 TGEDGFEVFIDASEAETVWDKLMAIG---VTPAGLGARDTLRLEAGFPLYGHEFADDIHPLSSHYTWVV-----KDKPFYGREALQQPAQQ----KLIGLKLDKVPVREGYPVL-QSGQVVGHVTSGTSSPTLGHPIALALVQAGAADA-TDFEVEVRGKAHPATRTDVPF 353
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEPA (Aminomethyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gcvT PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.282e-14 Identity = 62/176 (35.23%), Postives = 86/176 (48.86%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G ++ VP++ A L +A L+ ++ GLGARD+LRLEAG+ LYG DM++ V P+ A + W + AE F G + + K EG + VG H D G G ITSG FSP L +IAM V + G ++E+R K + FV Sbjct: 190 TGETGYEVIVPNDEAEALWQAFLDAG---IKPCGLGARDTLRLEAGMNLYGLDMDESVNPLAANMGWTVA-WEPAERDFNGRQALEKIKAEGTD-KLVGLIMDAKGVIRHGMSVFFTDSDGVEQQGTITSGTFSPTLGYSIAMARVPRSI---GDVAEVEMRKKRVPVKVIAPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEON (Aminomethyltransferase OS=Shewanella oneidensis GN=gcvT PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 63/176 (35.80%), Postives = 87/176 (49.43%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I + F+G K L+ L + + VG H D G G ITSG FSP L +IAM V S + G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPETEAEALWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPTDRDFIG-RKALEALRDAGTDKLVGLVMEEKGVLRHDMPVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARVPSSI---GDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEWM (Aminomethyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 67/185 (36.22%), Postives = 88/185 (47.57%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAI----------GKRRRAEGGFLGAEKILKQLDEGPPVRRVG---FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L A+LE V+ GLGARD+LRLEAG+ LYG DM++ V P+ A + W I G+ A G EK++ + E V R G FF S S ++QG ITSG FSP L +IAM V + ++E+R K + FV Sbjct: 190 TGETGYEIIVPDSEAEALWLALLEAG---VKPCGLGARDTLRLEAGMNLYGLDMDESVNPLAANMGWTIAWEPADRNFNGREALAAIKAAGTEKMVGLIMEAKGVIRPGMSVFF-------SDSDGVEQQGT----ITSGTFSPTLGYSIAMARVPRSI---ADTAEVEMRKKRVPVKVIAPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEB9 (Aminomethyltransferase OS=Shewanella baltica (strain OS195) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP + A + +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I ++ F+G K L+ L + + VG H D G G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEDEAQAMWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPSDRDFIG-RKALETLRDAGTDKLVGLVMEEKGVLRHDMPVFFTDSAGVEHQGVITSGTFSPTLGYSIAMARVPNSI---GDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEB8 (Aminomethyltransferase OS=Shewanella baltica (strain OS185) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP + A + +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I ++ F+G K L+ L + + VG H D G G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEDEAQAMWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPSDRDFIG-RKALETLRDAGTDKLVGLVMEEKGVLRHDMPVFFTDSAGVEHQGVITSGTFSPTLGYSIAMARVPNSI---GDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEB2 (Aminomethyltransferase OS=Shewanella baltica (strain OS223) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP + A + +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I ++ F+G K L+ L + + VG H D G G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEDEAQAMWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPSDRDFIG-RKALETLRDAGTDKLVGLVMEEKGVLRHDMPVFFTDSAGVEHQGVITSGTFSPTLGYSIAMARVPNSI---GDTAEVEMRKKRVAVRVVAPNFV 357 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |