CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEAM (Aminomethyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.638e-14 Identity = 63/176 (35.80%), Postives = 86/176 (48.86%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHS-KVHDEQGNPI---GEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L +A+L+ V+ GLGARD+LRLEAG+ LYG DM++ V P+ A + W I A+ F+G E L+ + + VG H V N + G ITSG FSP L +IAM V + G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEAEAEALWQALLDAG---VQPCGLGARDTLRLEAGMNLYGQDMDESVNPLAANMGWTIA-WEPADRDFIGRE-ALEAIKAKGSDKLVGLVMEEKGVLRHDMPVFFTDANGVEHQGVITSGTFSPTLGYSIAMARVPGAI---GETAEVEMRKKRVTVRVIAPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHESW (Aminomethyltransferase OS=Shewanella sp. (strain W3-18-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP + A L +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I + F+G K L+ L + + VG H D G G ITSG FSP L +IAM V ++ G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEDEAQALWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPTDRDFIG-RKALEALRDAGTDKLVGLVMEEKGVLRHDMPVFFTDAAGVEHQGVITSGTFSPTLGYSIAMARVP---NQIGDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEPC (Aminomethyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP + A L +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I + F+G K L+ L + + VG H D G G ITSG FSP L +IAM V ++ G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPEDEAQALWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPTDRDFIG-RKALEALRDAGTDKLVGLVMEEKGVLRHDMPVFFTDAAGVEHQGVITSGTFSPTLGYSIAMARVP---NQIGDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEB5 (Aminomethyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gcvT PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 61/176 (34.66%), Postives = 88/176 (50.00%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A + +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I ++ F+G K L+ L + + VG H D G G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEAGYEIIVPENEAEAMWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPSDRDFIG-RKALETLRDAGTDKLVGLVMEEKGVLRHDMPVFFTDSAGVEHQGVITSGTFSPTLGYSIAMARVPNSI---GDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHESR (Aminomethyltransferase OS=Shewanella sp. (strain MR-7) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13 Identity = 62/176 (35.23%), Postives = 87/176 (49.43%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I + F+G K L+ L + + VG H D G G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEVGYEIIVPETEAEALWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPTDRDFIG-RKALEALRDAGTDKLVGLVMEEKGVLRHDMPVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARVPNSI---GDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHESM (Aminomethyltransferase OS=Shewanella sp. (strain MR-4) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13 Identity = 62/176 (35.23%), Postives = 87/176 (49.43%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I + F+G K L+ L + + VG H D G G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEVGYEIIVPETEAEALWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPTDRDFIG-RKALEALRDAGTDKLVGLVMEEKGVLRHDMPVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARVPNSI---GDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHEHH (Aminomethyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gcvT PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 62/176 (35.23%), Postives = 84/176 (47.73%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G ++ VP A L +A LE ++ GLGARD+LRLEAG+ LYG DM++ V P+ A + W + A+ F G + + K EG + VG H D G G ITSG FSP L +IAM V + G ++E+R K + FV Sbjct: 190 TGETGYEVIVPEADAEALWQAFLEAG---IKPCGLGARDTLRLEAGMNLYGLDMDESVNPLAANMGWTVA-WEPADRDFNGRQALEKIKAEGTD-KLVGLIMDAKGVIRHGMSVFFTDSDGVEQQGIITSGTFSPTLGYSIAMARVPRSI---GDVAEVEMRKKRVPVKVIAPSFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_HALMA (Probable aminomethyltransferase OS=Haloarcula marismortui GN=gcvT PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.931e-13 Identity = 56/177 (31.64%), Postives = 84/177 (47.46%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGND---MEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I P + A + A+ + + GLGARD+LRLE G L G + +++ TP EAG+ W + + + F+ + + +GP + +G G P + V G PIG ITSG SP L IA+ YV S + V++ VRG+ PF+ Sbjct: 196 TGEPGFEILCPPDDAGVVWDAL------ECQPCGLGARDTLRLEMGFLLSGQEFHPVDEPRTPYEAGIGWTV----KLDTEFVARDALEGVAADGPEEKLIGIELVDRGVPRHGYD-VTTPDGEPIGHITSGTMSPTLGAPIALAYVPSAYAEPDKSVRVVVRGEPKKARTRSTPFL 361
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SHESA (Aminomethyltransferase OS=Shewanella sp. (strain ANA-3) GN=gcvT PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13 Identity = 61/176 (34.66%), Postives = 86/176 (48.86%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSK---VHDEQG-NPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G +I VP A L +A+L++ V+ GLGARD+LRLEAG+ LYG DM++ + P+ A + W I + F+G + + D G + VG H D G G ITSG FSP L +IAM V + + G ++E+R K + FV Sbjct: 190 TGEVGYEIIVPETEAEALWQALLDQG---VKPCGLGARDTLRLEAGMNLYGLDMDETINPLAANMGWTIA-WEPTDRDFIGRQALEALRDAGTD-KLVGLVMEEKGVLRHDMPVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARVPNSI---GDTAEVEMRKKRVAVRVVAPNFV 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_AERPE (Probable aminomethyltransferase OS=Aeropyrum pernix GN=gcvT PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.303e-13 Identity = 54/180 (30.00%), Postives = 85/180 (47.22%), Query Frame = -3 Query: 210 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVT--PVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-----FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 728 TGEDG +I E A + KA +E + G+ ARD+LR+EAG L G++ + P L + +G + GF+G + EG RVG +A P + D+ +G +TSG FSP + + +A Y+ S G ++++VRGK + + + P VP Sbjct: 196 TGEDGFEIIAEVEAAKRIFKAAVEAG---AKPAGIAARDTLRIEAGFVLGGHEYGEDPLRWPCAVSLRYGLGAIDWGKKGFVGEAALRACRREGVRWIRVGLVMKKKYARMIPRSGYRLYVDDVD--VGWVTSGTFSPVIGRGVAQAYIDSRYAYIGDTIEVDVRGKRGEARLQEFPLVP 370 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |