CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SYNPX (Aminomethyltransferase OS=Synechococcus sp. (strain WH8102) GN=gcvT PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 63/171 (36.84%), Postives = 92/171 (53.80%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ + + L + +L++ V GLGARD+LRLEA + LYG DM TP EAGL W + + F+G + + + + GP R VG G H G +G +TSG +SP L++ IA+ YV + L K G ++ +E+RGKA + K PF Sbjct: 198 TGEDGAELLLTAADGQKLWQILLDRG---VSPCGLGARDTLRLEAAMHLYGMDMNAETTPFEAGLGWLVHLEMPVD--FVGRQALEQAAESGPTKRLVGLKLQGRAIARHDYPVLHNGETVGVVTSGTWSPTLEEPIALAYVPTALAKLGAELSVEIRGKAQPACVVKRPF 363
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_COXBU (Aminomethyltransferase OS=Coxiella burnetii GN=gcvT PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.576e-23 Identity = 76/174 (43.68%), Postives = 96/174 (55.17%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPP-ARSHSKVH-DEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDGL+I VP+ RA DL + + V+ GLGARD+LRLEAGL LYG DM++ +P+ + L+W + A+ F+G + KQLDE R +G P R+H KV E G G ITSGGFSP L IA+ V G K +E RGK I K PFV Sbjct: 192 TGEDGLEIIVPASRATDLWARFVHQG---VKPCGLGARDTLRLEAGLNLYGTDMDETTSPLISNLSWTV-SWNDADRNFIGRRALEKQLDENVKERLIGLVMEEPGILRNHQKVWLTEDGE--GIITSGGFSPTLGHAIALARVPVG---EVEKATVERRGKKIPVKIIKPPFV 356
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CHLTE (Aminomethyltransferase OS=Chlorobium tepidum GN=gcvT PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.059e-23 Identity = 67/175 (38.29%), Postives = 104/175 (59.43%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G++I +P+ERAV L A++E KS+G ++ GLGARD+LRLE G LYG+++E+ V P+EA L W + + + F+G ++ +Q++ P VGF G R H KV++ IGE+ SG SP L++ I + + GT + +E+RG G + ++PFV Sbjct: 191 TGEAGVEICLPNERAVALWSALMEAGKSDG-IQPIGLGARDTLRLEMGYSLYGHEIERDVNPLEARLKWVV---KLNKPNFIG-KQACEQVEINPRKSVVGFSLEGRAIPRQHFKVYNSDKQEIGEVCSGTVSPTLQEPIGTASLLLDYAQPGTPIFVEIRGTMQPGAVRRLPFV 360
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEPIN (Aminomethyltransferase OS=Leptospira interrogans GN=gcvT PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 71/178 (39.89%), Postives = 100/178 (56.18%), Query Frame = -3 Query: 210 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 728 TGEDG +I + L +LE K G + GLGARD+LR+EA LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 194 TGEDGFEIYSSIPIGLKLWNELLEFGKPYGLL-PCGLGARDTLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEPIC (Aminomethyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvT PE=3 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 71/178 (39.89%), Postives = 100/178 (56.18%), Query Frame = -3 Query: 210 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 728 TGEDG +I + L +LE K G + GLGARD+LR+EA LYG+++ TP+E+G+ W + ++ E + +EKIL Q G P + V F AG P R + +V D QGN IG+ TSG FSP LKK I + ++S K G ++IE+R + IT PF+P Sbjct: 194 TGEDGFEIYSSIPIGLKLWNELLEFGKPYGLL-PCGLGARDTLRIEAKYPLYGHELNDQWTPIESGIGWIVKEK---ENPYFSSEKILFQKKNGVPSKIVSFALTEAGVP--RENFRVLDSQGNEIGKTTSGTFSPSLKKGIGLALIQSEKIKDGEPIQIEIREQPKQAIITMKPFIP 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEGPL (Aminomethyltransferase OS=Legionella pneumophila (strain Lens) GN=gcvT PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 66/172 (38.37%), Postives = 96/172 (55.81%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDGL+I VP+E L +L V GLGARD+LRLEAG+ LYG DM++ TP+E+GLTW + K + GF+G ++ Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 190 TGEDGLEIIVPNEFVTQLWNDLLNAG---VTPCGLGARDTLRLEAGMLLYGQDMDETTTPLESGLTWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPV---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_ANOFW (Aminomethyltransferase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=gcvT PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.689e-23 Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ +E A L +AILE K EG V GLGARD+LR EA L LYG ++ + +TP+EAGL +A+ + + F G E + KQ +EG P R VG H IG +T+G SP LKKNI + + + T+V+++VRGK + PF Sbjct: 190 TGEDGFELYCRAEDAPTLWRAILEAGKEEG-VLPCGLGARDTLRFEACLPLYGQELAKDITPIEAGLGFAVKTNKDVD--FFGKEILKKQKEEGAPRRLVGIEMIDKGIARHGYAVYVNNEQIGFVTTGTQSPTLKKNIGLALISTAFSSLDTEVEVDVRGKRLKARVVATPF 359
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SYNS3 (Aminomethyltransferase OS=Synechococcus sp. (strain CC9311) GN=gcvT PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23 Identity = 62/171 (36.26%), Postives = 94/171 (54.97%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG+++ + ++ L + +LE+ V GLGARD+LRLEA + LYG DM+ TP EAGL W + A F+G + + + ++GP R VG G H G +G +TSG +SP L++ IA+ + L K GT++ +E+RG+ + K PF Sbjct: 200 TGEDGVELLLKADDGRQLWQLLLEEG---VTPCGLGARDTLRLEAAMHLYGQDMDAATTPFEAGLGWLVHLEMPAL--FIGRQALEQAAEQGPSKRLVGLKLQGRSIARHDYPVIHNGATVGVVTSGSWSPTLQEPIALASLPPALAKLGTELSVEIRGQLQPATVVKRPF 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SYNP2 (Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=gcvT PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.512e-23 Identity = 66/171 (38.60%), Postives = 87/171 (50.88%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ V L A+++ V GLGARD+LRLEAGL LYG DM+ TP+EAGL W I + + F+ + + Q G R VG G H G +G +TSG SP L+K IA+ Y+ K G V +E+RGK Y + K PF Sbjct: 192 TGEDGFEVMVAPTAGKKLWSALIDAG---VMPCGLGARDTLRLEAGLHLYGQDMDDDTTPLEAGLGWLI--HWQEKDAFIAKDILQTQKAAGVQRRLVGLEMQGRGIARHDYSVLVNGEAVGLVTSGTMSPTLEKAIALAYLPLEFSKVGQAVTVEIRGKQYPAQVVKKPF 357
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_RALME (Aminomethyltransferase OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=gcvT PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.990e-23 Identity = 68/178 (38.20%), Postives = 100/178 (56.18%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG------GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ VP+E + + + S VR GLGARD+LRLEAG+ LYG DM+ H +P++AGL+W + ++E F+G +L + FAG G R+H KV G+ GEITSG FSP L ++IA + + GT+V++E+R + + K+PFV Sbjct: 205 TGEDGFELVVPAENVAGIWEKL---SASGVRPAGLGARDTLRLEAGMNLYGQDMDIHTSPLDAGLSWTVD--LQSERDFIGKSALLASGQQKT-------FAGLILRDKGGVLRAHQKVITPAGD--GEITSGTFSPSLSQSIAFARLPRDI-APGTEVQVEIRDRKLTATVVKLPFV 367 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |