CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEGPH (Aminomethyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=gcvT PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.823e-23 Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDGL+I VP+E L +L V GLGARD+LRLEAG+ LYG DM++ TP+E+GL W + K + GF+G ++ Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 190 TGEDGLEIIVPNEFVTQLWNDLLHAG---VTPCGLGARDTLRLEAGMLLYGQDMDETTTPLESGLAWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPM---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THISH (Aminomethyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=gcvT PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 73/173 (42.20%), Postives = 97/173 (56.07%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG +I +P+ A + K G V+ GLGARD+LRLEAG+ LYG DM++ V+P+E+GL W + AE F+G + KQ G R VG G R H +V GEITSGGFSP L +IA+ V +G G +V+++VRGK + K PFV Sbjct: 190 TGEDGFEIMLPAAEAPAFWDRL--KVAG-VQPAGLGARDTLRLEAGMNLYGQDMDEQVSPLESGLAWTVA-FEPAERDFVGRAALEKQKAAGGLRRFVGLVLEGRGVLRGHMRVLCGAAGE-GEITSGGFSPTLGVSIALARVPAG---TGERVEVDVRGKPQPARLVKPPFV 354
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_NITEU (Aminomethyltransferase OS=Nitrosomonas europaea GN=gcvT PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.022e-22 Identity = 71/177 (40.11%), Postives = 100/177 (56.50%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRR--VGF-FAGGPPARSHSKVHDEQGNPI--GEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG +I++P+ +A D + + V GLGARD+LRLEAG+ LYG DM++ V P+E+GL W + ++E F G + +L+ PV R VG R+H KV Q GEITSGGFSP L ++IA+ + +G+ AG +V + VR K + K PFV Sbjct: 191 TGEDGFEITLPAGQAADFWQKL---HAAGVAPAGLGARDTLRLEAGMNLYGQDMDETVNPLESGLAWTVD--LKSERDFTGKQTLLE-----TPVNRQLVGLVLLDKGVLRNHQKVITRQEGEAGEGEITSGGFSPTLNQSIALARIPAGI-AAGEQVHVVVRDKQLAAKVVKYPFV 356
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SYMTH (Aminomethyltransferase OS=Symbiobacterium thermophilum GN=gcvT PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22 Identity = 63/174 (36.21%), Postives = 101/174 (58.05%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I V +E L +A+LE + + + GLGARD+LR EA L LYG+++ P+EAGL +A+ ++ + F+G + + + ++GP + VG G P + + G +GE+T+G FSP L+KNIA+ YV GT+V++ +RG+A + + PF Sbjct: 199 TGEDGFEIYVKAEDVAALWEALLEAGDEQGLLPCGLGARDTLRFEAKLPLYGHEISDQHNPLEAGLGFAVKLKKGVD--FIGRDALARIKEQGPTRKLVGIEMIDRGVPRQGYPVAVG--GEVVGEVTTGSFSPTLEKNIALAYVPVAHSAVGTEVEVIIRGRALKARVVETPF 368
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEGPC (Aminomethyltransferase OS=Legionella pneumophila (strain Corby) GN=gcvT PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.334e-22 Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDGL+I VP+E L +L V GLGARD+LRLEAG+ LYG DM++ TP+E+GL W + K + GF+G ++ Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 190 TGEDGLEIIVPNEFITQLWNDLLNAG---VTPCGLGARDTLRLEAGMLLYGQDMDETTTPLESGLAWTV-KWEPEDRGFIGMGALVSQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPV---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEGPA (Aminomethyltransferase OS=Legionella pneumophila (strain Paris) GN=gcvT PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 65/172 (37.79%), Postives = 94/172 (54.65%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDGL+I VP+E L +L V GLGARD+LRLEAG+ LYG DM++ TP+E+GL W + K + GF+G + Q +G + VG H + +G P G ITSG +SP L+++IA+ V + G +V +++RGK + K F+ Sbjct: 190 TGEDGLEIIVPNEFVTQLWNDLLNAG---VTPCGLGARDTLRLEAGMLLYGQDMDETTTPLESGLAWTV-KWEPEDRGFIGMGALASQKQQGIKRKMVGLTLLDKGIMRHGQKVIIEGCPDGIITSGSYSPTLQQSIALARVPV---ETGEQVLVDIRGKLIPAKVGKPRFI 354
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BURP8 (Aminomethyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=gcvT PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.743e-22 Identity = 72/176 (40.91%), Postives = 102/176 (57.95%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKI----LKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG +I VP+ L A+ +++G VR GLGARD+LRLEAG+ LYG DM+ V+P++AGL W + E F+G K+ KQ G + + A G R+H KV G GEITSG FSP ++++IA V G+ + G V +++R KA ++ K+PFV Sbjct: 198 TGEDGFEIIVPAAHVEALWNAL--QAQG-VRPAGLGARDTLRLEAGMNLYGQDMDDDVSPLDAGLAWTVDLSAPRE--FIGRAKLEADGSKQSFVGLILHKDNGKAAG-VLRAHQKVVTPNGE--GEITSGTFSPTMQESIAFARVPKGV-QPGDVVHVQIRDKALPASVVKLPFV 364
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PROMA (Aminomethyltransferase OS=Prochlorococcus marinus GN=gcvT PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22 Identity = 64/171 (37.43%), Postives = 90/171 (52.63%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I + + L + ++E V GLGARD+LRLEAG+ LYGND+ TP EAGL W + E F+G ++KQ +EG + V G + +GEITSG +SP L + IA+ Y+ L K GT V +++R K + + K PF Sbjct: 203 TGEDGYEILLNTNAGKSLWRELIENG---VTPCGLGARDTLRLEAGMPLYGNDINNTTTPFEAGLGWLVHLETPDE--FIGKAALVKQTNEGINKKLVALKIEGRAIARKGYQIMFKNKFVGEITSGSWSPTLNEGIALAYLPIDLTKIGTAVSVQIRDKLHTAIVAKKPF 368
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_OCEIH (Aminomethyltransferase OS=Oceanobacillus iheyensis GN=gcvT PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22 Identity = 66/181 (36.46%), Postives = 99/181 (54.70%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG--FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG +I + + V L K +LEK E + GLGARD+LR EA L LYG ++ + ++P+EAGL +A+ + + F+G E + Q++ G + VG G P + + D + IG ITSG SP L KN+ + + + GT+V ++VR + I K VPT +YK Sbjct: 197 TGEDGFEIYIDASSGVALWKLLLEKGEANGLEPIGLGARDTLRFEANLALYGQELSKDISPIEAGLGFAVKVNKGPD--FIGKEVLKNQVENGTDRKLVGIEMIDKGIPRHEYEVLKDNK--EIGFITSGTQSPTLNKNVGLALINISYTEIGTEVDVKVRKR-----ILKAKIVPTPFYK 368
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_GEOTN (Aminomethyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=gcvT PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22 Identity = 68/179 (37.99%), Postives = 98/179 (54.75%), Query Frame = -3 Query: 195 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYK 728 TGEDG ++ +E A+ L +AIL +E V GLGARD+LR EA L LYG ++ ++P+EAGL +A+ + E F+G + +Q + GPP R VG H G G +T+G SP LKKNI + VK+ + G +V++++RGK K VPT +YK Sbjct: 190 TGEDGFELYCQAEDAITLWEAILTAGAEDGVLPCGLGARDTLRFEACLPLYGQELSATISPLEAGLGFAV--KTEKEPPFIGQAVLKQQKEAGPPRRLVGIEMIDKGIPRHGYRVFAAGEEAGFVTTGTQSPTLKKNIGLALVKAEVAAIGQEVEVDIRGKR-----LKATIVPTPFYK 361 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |