CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CHRVO (Aminomethyltransferase OS=Chromobacterium violaceum GN=gcvT PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22 Identity = 71/173 (41.04%), Postives = 97/173 (56.07%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDGL+I VP+++A+ + V GLGARD+LRLEAG+ LYG+DM++ V+P+EAG+ W I AE F G E + Q G +++VG G R KV E G ITSG FSP LK +IA+ V + G ++++RG D + KMPFV Sbjct: 190 TGEDGLEIMVPADQAISFFHQL---QAAGVSPIGLGARDTLRLEAGMNLYGHDMDETVSPLEAGMGWTIA-WEPAERKFNGREALEAQKAAGVKMKQVGLVLEGRGVLREGLKVVVESVGE-GVITSGTFSPTLKHSIAIARVPAA---TGAAAQVDLRGTLTDVRVVKMPFV 354
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_SYNPW (Aminomethyltransferase OS=Synechococcus sp. (strain WH7803) GN=gcvT PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22 Identity = 62/171 (36.26%), Postives = 87/171 (50.88%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG+++ + E +L ++ V GLGARD+LRLEA + LYG DM+ TP EAGL W + F G + + D GP R VG G H G G ITSG +SP L++ IA+ YV + L K G ++ +E+RG+ + + PF Sbjct: 200 TGEDGVELLLAREDGRNLWNRLVADG---VTPCGLGARDTLRLEAAMHLYGQDMDADTTPFEAGLGWLV--HLEMPSTFTGRAALERAADSGPSRRLVGLKLKGRAIARHGYPVIHNGEQAGAITSGSWSPTLQEAIALAYVPTALAKVGQELGVEIRGQVQAATVVRRPF 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_RALPJ (Aminomethyltransferase OS=Ralstonia pickettii (strain 12J) GN=gcvT PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22 Identity = 67/174 (38.51%), Postives = 99/174 (56.90%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA--GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ VP+ + + + +L+ VR GLGARD+LRLEAG+ LYG DM++HV+P++AGL W + ++E F G + G + VG G R+H KV G+ GEITSG FSP L +IA+ + + GT V++E+R + + K+PFV Sbjct: 205 TGEDGFELVVPAAQIAGVWERLLQAG---VRPAGLGARDTLRLEAGMNLYGQDMDEHVSPLDAGLAWTVD--LQSERDFTGKAALQA---GGQREQFVGLILRDKGGVLRAHQKVITAAGD--GEITSGTFSPSLSLSIALARLPKEV-PVGTDVQVEIRDRKLTATVVKLPFV 367
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_THET8 (Aminomethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=gcvT PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22 Identity = 67/176 (38.07%), Postives = 96/176 (54.55%), Query Frame = -3 Query: 204 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF-FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTK 728 TGEDG ++ + E A + A++E + GLGARDSLRLEAG LYG+++ + P+ W + K E FLG E +L Q R VG GG P + + G P+G +TSGG+SP L++ IA+ YV+ G A ++EVRG+A ++ +PFVP K Sbjct: 189 TGEDGFELFLAPEDAEPVFLALVEAG---AKPAGLGARDSLRLEAGFPLYGHELTEETNPLCTPWAWVVKK----EKAFLGKEAMLAQACR---ERLVGLVLEGGIPREGYRVL--SGGRPVGRVTSGGYSPLLQRGIALAYVEEG---AEGPFQVEVRGRAVPAALSPLPFVPLK 349
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACCN (Aminomethyltransferase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=gcvT PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.623e-22 Identity = 70/183 (38.25%), Postives = 103/183 (56.28%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEKSE-GKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A+ + + +LE E ++ GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+ + A+ F G E + + + G P + VG G P R+H V+ + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAIKIWEKLLEVGEEDSLKPCGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKEVLKEYKENGAPRKLVGIEVIERGIP-RTHYPVYVGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAIDTEVEIEIRKKR-----VKAVVVPTPFYKRS 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_RALSO (Aminomethyltransferase OS=Ralstonia solanacearum GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 66/174 (37.93%), Postives = 99/174 (56.90%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA--GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ VP+ + + + +L+ VR GLGARD+LRLEAG+ LYG DM++HV+P++AGL W + ++E F G + G + VG G R+H KV G+ GEITSG FSP L ++IA+ + + G V++E+R + + K+PFV Sbjct: 205 TGEDGFELVVPAAQIAGVWERLLQAG---VRPCGLGARDTLRLEAGMNLYGQDMDEHVSPLDAGLAWTVD--LQSERDFNGKAALAA---NGQRDQFVGLLLRDKGGVLRAHQKVITAAGD--GEITSGTFSPSLSQSIALARLPKDV-AIGADVQVEIRDRRLTATVVKLPFV 367
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PROMP (Aminomethyltransferase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 64/171 (37.43%), Postives = 93/171 (54.39%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGE+GL+I + ++ A++L ++ K+ ++ GLGARD+LRLEAG+ LYG D+ + TP EAGL W + + F G E + KQ G + VG G + G IG ITSG +SP +K IA Y+++ V+I +RGK + G ITK F Sbjct: 200 TGENGLEILLSAKAAINLWDFLVSKN---IKPCGLGARDTLRLEAGMHLYGQDLNETTTPYEAGLGWLVHLENNHD--FFGREFLEKQSRFGINKKLVGLNIEGRAIGRKGCEVFKDGENIGTITSGSWSPTKQKAIAFAYIQNSYATLNNVVEILIRGKTFKGTITKRAF 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_PELPB (Aminomethyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 66/177 (37.29%), Postives = 98/177 (55.37%), Query Frame = -3 Query: 207 TGEDGLKISVPSERAVDLAKAILEKS-EGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFA--GGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPT 728 TGE G++I +P+ A+ L +A+ E E ++ GLGARD+LRLE G LYG++++Q P+EA L W + + +G F+G E Q EG R V F+ G R H K+++ IG + SG SP L++ + V K GT + +EVRG + G I ++PFV T Sbjct: 191 TGEKGVEICLPNAMALPLWEALFEAGKESGIQPIGLGARDTLRLEMGYSLYGHEIDQDTNPLEARLKWVV---KMGKGHFMGKEAC--QQVEGNLKRGVAGFSLDGRVLPRQHFKLYNSDRQEIGWVCSGTLSPTLQEPVGTCNVVREYLKPGTPILVEVRGSLHTGVIRRLPFVTT 362
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CORA7 (Aminomethyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 66/175 (37.71%), Postives = 107/175 (61.14%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGK-VRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAG-GPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYV--KSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG ++ V + A +L + +L+ E ++ GL ARDSLRLEAG+ LYGN++ + +TPVEAG++ A K+ E F+GAE + ++ +EGP G + AR+ S+V+ + N +G +TSG SP L +A+ + +GL + G V++++RGK Y ++ +PF Sbjct: 196 TGEDGFELIVYNSDAPELWEELLKAGEEYGIKPCGLAARDSLRLEAGMPLYGNELTRDITPVEAGMSRAFAKK---EQDFVGAEVLRQRAEEGPQAVITGLVSSQRRAARAGSEVYVGE-NKVGTVTSGQPSPTLGHPVALALIDTAAGL-EPGAAVEVDIRGKRYPFEVSALPF 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CHLP8 (Aminomethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 64/175 (36.57%), Postives = 101/175 (57.71%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILE--KSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFFAGGPP-ARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGE G++I +P+E A L A++ K++G ++ GLGARD+LRLE G LYG++++Q V P+EA L W + + + F+G ++ +Q++ P VGF G R H KV++ IGE+ SG SP L++ I + K GT + +E+RG G + ++PFV Sbjct: 191 TGEAGVEICLPNEEAEALWTALMAAGKNDG-IQPIGLGARDTLRLEMGYSLYGHEIDQTVNPLEARLKWVV---KMDKPNFIG-KQACQQVELDPRKSVVGFSLDGRAIPRQHFKVYNSDKQEIGEVCSGTVSPTLQEPIGTASLLRDYAKTGTPIFVEIRGTFQPGTVRRLPFV 360 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |