CX296843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_CARHZ (Aminomethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 64/173 (36.99%), Postives = 94/173 (54.34%), Query Frame = -3 Query: 216 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVG--FFAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPF 728 TGEDG +I A + +L V+ GLGARD+LR EA L LYG+++ +TP+EAGL WA+ + F+G E +L Q + G + VG G P + + V +++G +G +TSG F+P LKKN+AM V + GT+V + +RGK + PF Sbjct: 191 TGEDGFEIYFAPNLATKIWNELLNLG---VKPAGLGARDTLRFEACLPLYGHELSAEITPLEAGLGWAVKFNKE---DFIGKEALLAQKNAGLKRKIVGLEMIGAGIPRQGYEIVFNQRG--VGFVTSGTFAPFLKKNLAMAMVDLEAAEIGTEVDVIIRGKGVRARVISRPF 355
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BURA4 (Aminomethyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 66/178 (37.08%), Postives = 97/178 (54.49%), Query Frame = -3 Query: 213 TGEDGLKISVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF------AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFV 728 TGEDG ++ VP+ L A+ + VR GLGARD+LRLEAG+ LYG DM++ V+P++AGL W + A F+G + + + +G VG G R+H KV G GEITSG FSP ++++IA V + +H G + +++R K + K+PFV Sbjct: 198 TGEDGFEVIVPAVHVEALWTALQQNG---VRPCGLGARDTLRLEAGMNLYGQDMDETVSPLDAGLAWTVD--LSAPRDFVGRDALER---DGTRAAFVGLILQKENGKAGGVLRAHQKVVTPHGE--GEITSGTFSPSMQESIAFARVPAAVH-VGDTIHVQIRDKQLPARVVKLPFV 364
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACCQ (Aminomethyltransferase OS=Bacillus cereus (strain Q1) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A L + +LE +E ++ GLGARD+LR EA L LYG ++ + +TPVEAG+ +A+ + A+ F G + +Q + G P + VG G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGARDTLRFEATLPLYGQELSKDITPVEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACC7 (Aminomethyltransferase OS=Bacillus cereus (strain AH187) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A L + +LE +E ++ GLGARD+LR EA L LYG ++ + +TPVEAG+ +A+ + A+ F G + +Q + G P + VG G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGARDTLRFEATLPLYGQELSKDITPVEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACC1 (Aminomethyltransferase OS=Bacillus cereus (strain ATCC 10987) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.650e-22 Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A L + +LE +E ++ GLGARD+LR EA L LYG ++ + +TPVEAG+ +A+ + A+ F G + +Q + G P + VG G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGARDTLRFEATLPLYGQELSKDITPVEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_LEPBJ (Aminomethyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21 Identity = 67/178 (37.64%), Postives = 100/178 (56.18%), Query Frame = -3 Query: 210 TGEDGLKI--SVPSERAVDLAKAILEKSEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGFF---AGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVP 728 TGEDG +I S+P + + L K +G + GLGARD+LR+EA LYG+++ TP+E+G+ W + +++ + + KIL Q G + V F AG P R + +V D QGN IG+ TSG FSP LKK I + +++ K G ++IE+R + IT PF+P Sbjct: 194 TGEDGFEIYSSIPFGLKLWSGLSELGKPQGLL-PCGLGARDTLRIEAKYPLYGHELNNQWTPIESGIGWIVKEKKNP---YFSSGKILSQKKNGTEFKIVAFALTEAGVP--RENFRVLDFQGNEIGKTTSGTFSPSLKKGIGLASIRTEKIKDGEPIQIEIREQPKQAIITTKPFIP 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACHK (Aminomethyltransferase OS=Bacillus thuringiensis subsp. konkukian GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21 Identity = 71/183 (38.80%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A L + +LE +E ++ GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+ + A+ F G + +Q + G P + VG G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACCZ (Aminomethyltransferase OS=Bacillus cereus (strain ZK / E33L) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21 Identity = 71/183 (38.80%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A L + +LE +E ++ GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+ + A+ F G + +Q + G P + VG G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKPCGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKPNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACCR (Aminomethyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21 Identity = 71/183 (38.80%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A L + +LE +E ++ GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+ + A+ F G + +Q + G P + VG G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365
BLAST of CX296843 vs. ExPASy Swiss-Prot
Match: GCST_BACC4 (Aminomethyltransferase OS=Bacillus cereus (strain B4264) GN=gcvT PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21 Identity = 71/183 (38.80%), Postives = 102/183 (55.74%), Query Frame = -3 Query: 189 TGEDGLKISVPSERAVDLAKAILEK-SEGKVRXTGLGARDSLRLEAGLCLYGNDMEQHVTPVEAGLTWAIGKRRRAEGGFLGAEKILKQLDEGPPVRRVGF--FAGGPPARSHSKVHDEQGNPIGEITSGGFSPCLKKNIAMGYVKSGLHKAGTKVKIEVRGKAYDGNITKMPFVPTKYYKPS 728 TGEDG +I SE A L + +LE +E ++ GLGARD+LR EA L LYG ++ + +TP+EAG+ +A+ + A+ F G + +Q + G P + VG G P R+H V + IGE+TSG SP LKK+I + + T+V+IE+R K K VPT +YK S Sbjct: 192 TGEDGFEIYCKSEDAAKLWEKLLEVGAEEGLKACGLGARDTLRFEATLPLYGQELSKDITPIEAGIGFAVKTNKEAD--FFGKATLKEQKENGAPRKLVGIEVIERGIP-RTHYPVFIGE-EKIGEVTSGTQSPTLKKSIGLALIDVKYAAVDTEVEIEIRNKR-----VKAVVVPTPFYKRS 365 The following BLAST results are available for this feature:
BLAST of CX296843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 333
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296843 ID=CX296843; Name=CX296843; organism=Citrus clementina; type=EST; length=730bpback to top |