CX296846

Overview
NameCX296846
Unique NameCX296846
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length757
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11611 contig Ccv1_Contig11611:594..1350. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAAU (GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43
Identity = 99/219 (45.21%), Postives = 141/219 (64.38%), Query Frame = 3
Query:    9 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 665
            E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+ +  Y +   Y ++   +     E E  +E A
Sbjct:   18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYIETA 228          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAAS (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476) GN=relA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43
Identity = 99/219 (45.21%), Postives = 141/219 (64.38%), Query Frame = 3
Query:    9 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 665
            E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+ +  Y +   Y ++   +     E E  +E A
Sbjct:   18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYIETA 228          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAAR (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=relA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43
Identity = 99/219 (45.21%), Postives = 141/219 (64.38%), Query Frame = 3
Query:    9 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 665
            E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+ +  Y +   Y ++   +     E E  +E A
Sbjct:   18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYIETA 228          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAAN (GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315) GN=relA PE=1 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43
Identity = 99/219 (45.21%), Postives = 141/219 (64.38%), Query Frame = 3
Query:    9 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 665
            E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+ +  Y +   Y ++   +     E E  +E A
Sbjct:   18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYIETA 228          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAAM (GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=relA PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 5.578e-43
Identity = 99/219 (45.21%), Postives = 141/219 (64.38%), Query Frame = 3
Query:    9 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 665
            E L    SYLS +E E V ++  +A+EAH GQ R++G P+I+HP++VA IL E+ LD  +I AG LHD +EDT   TFE ++E F   V RIV+G TK+ K+ K + K E       +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL  MP  KQ  I+ ETL+++APLA  LG+  IK ELE+ +  Y +   Y ++   +     E E  +E A
Sbjct:   18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYIETA 228          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_AQUAE (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex aeolicus GN=spoT PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.623e-42
Identity = 103/233 (44.21%), Postives = 150/233 (64.38%), Query Frame = 3
Query:    3 LWEDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDD 698
            L EDL   +S+  P   E ++RA   A E H  QKR++GEP+IIHP+ VA  L EL +D E+I A LLHDT+EDT+  T+E I+E FG  V ++VEG   V+K+GK+K K+E       +A++ R++ LA  E+ RVI++KL+DRL N++TL      K+  IA ET++++APLA  LG++ IK+ELE+ +F Y   E+Y KV+  V    KE  K LEE   K ++ K+  +
Sbjct:    9 LEEDLEKLLSHY-PQHAEEIQRAYEFAKEKHGEQKRKTGEPYIIHPLNVALKLAELGMDHETIIAALLHDTLEDTDT-TYEEIKERFGERVAKLVEG---VTKIGKIKYKSE-------QAENYRKLILATAEDPRVILLKLSDRLDNVKTLWVFREEKRKKIAKETMEIYAPLAHRLGVWSIKNELEDWAFKYLYPEEYEKVRNFV----KESRKNLEEYLRKYVIPKVRKE 225          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_HAEIN (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Haemophilus influenzae GN=spoT PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 2.119e-42
Identity = 93/196 (47.45%), Postives = 136/196 (69.39%), Query Frame = 3
Query:   75 MLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE 662
            M+A +AH+GQ R SGEP+I HPV VA I+ +L LD E++ A LLHD +EDT   T E+++EEFGA+V  IV+G   VSKL KLK +      Q+ + ++ R+M LAMT ++RV+++KLADR HNMRTL  + P K+  IA ETL+++ PLA  LG+  IK+ELE+LSF   +   Y +V +++ D+ + + ++L E
Sbjct:    1 MIARDAHEGQFRSSGEPYITHPVAVASIIAQLHLDHEAVMAALLHDVIEDTPY-TEEQLKEEFGASVAEIVDG---VSKLDKLKFRTR----QEAQVENFRKMILAMTRDIRVVLIKLADRTHNMRTLGSLRPDKRRRIAKETLEIYCPLAHRLGIEHIKNELEDLSFQAMHPHRY-EVLKKLVDVARSNRQDLIE 187          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_VIBCH (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Vibrio cholerae GN=spoT PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.722e-42
Identity = 94/208 (45.19%), Postives = 142/208 (68.27%), Query Frame = 3
Query:   33 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKEL 656
            YL+  ++E +R++ ++A +AH+GQ R SGEP+IIHPV VARIL E+ LD E++ A LLHD +ED +V T E ++  FG++V  +V+G   VSKL KLK ++     ++ +A++ R+M LAM +++RVI++KLADR  NMRTL  + P K+  IA ETL+++APLA  LG++ IK+ELE L F       Y +V + V    + + KE+
Sbjct:   14 YLTEPQIEALRQSYVVARDAHEGQTRSSGEPYIIHPVAVARILAEMRLDLETLQAALLHDVIEDCDV-TKEDLDAHFGSSVAELVDG---VSKLDKLKFRDR----KEAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLAHRLGIHNIKTELEELGFEALYPNRY-RVLKEVVKAARGNRKEM 212          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RSH_BRUO2 (GTP pyrophosphokinase rsh OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rsh PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.997e-41
Identity = 95/214 (44.39%), Postives = 139/214 (64.95%), Query Frame = 3
Query:   57 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 698
            L+ +A + A + H  QKR SG+P+  HP+EVA IL ++ LD  +IA  LLHDT+EDT   T + I++ FG  + ++VEG TK+ KL  +       S + V+A++LR++ LA++E+VRV++VKLADRLHNMRTL  M   K+  IA ET+ ++APLA  +GM  ++ ELE L+F Y N + +  V  R+A        EL E N+ L++KIE D
Sbjct:   22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA-TRQEIDQLFGPEIGKLVEGLTKLKKLDLV-------SKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTDRLA--------ELLEKNRGLLQKIETD 219          
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RSH_BRUAB (GTP pyrophosphokinase rsh OS=Brucella abortus GN=rsh PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.997e-41
Identity = 95/214 (44.39%), Postives = 139/214 (64.95%), Query Frame = 3
Query:   57 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 698
            L+ +A + A + H  QKR SG+P+  HP+EVA IL ++ LD  +IA  LLHDT+EDT   T + I++ FG  + ++VEG TK+ KL  +       S + V+A++LR++ LA++E+VRV++VKLADRLHNMRTL  M   K+  IA ET+ ++APLA  +GM  ++ ELE L+F Y N + +  V  R+A        EL E N+ L++KIE D
Sbjct:   22 LLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEATIAIALLHDTIEDTTA-TRQEIDQLFGPEIGKLVEGLTKLKKLDLV-------SKKAVQAENLRKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMREELEELAFRYINPDAWRAVTDRLA--------ELLEKNRGLLQKIETD 219          
The following BLAST results are available for this feature:
BLAST of CX296846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
RELA_STAAU4.271e-4345.21GTP pyrophosphokinase OS=Staphylococcus aureus GN=... [more]
RELA_STAAS4.271e-4345.21GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAR4.271e-4345.21GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAN4.271e-4345.21GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
RELA_STAAM5.578e-4345.21GTP pyrophosphokinase OS=Staphylococcus aureus (st... [more]
SPOT_AQUAE1.623e-4244.21Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
SPOT_HAEIN2.119e-4247.45Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
SPOT_VIBCH4.722e-4245.19Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
RSH_BRUO23.997e-4144.39GTP pyrophosphokinase rsh OS=Brucella ovis (strain... [more]
RSH_BRUAB3.997e-4144.39GTP pyrophosphokinase rsh OS=Brucella abortus GN=r... [more]

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Properties
Property NameValue
Genbank descriptionC05803E01SK FerrChloL1 Citrus clementina cDNA clone C05803E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296846 ID=CX296846; Name=CX296846; organism=Citrus clementina; type=EST; length=757bp
GGTTGTGGGAGGATCTTAGGCCCACCATATCATACCTTTCACCTAATGAA
TTGGAATTGGTCCGTAGAGCTCTGATGTTGGCTTTTGAGGCGCATGATGG
TCAGAAAAGACGGAGTGGAGAGCCTTTCATCATTCATCCAGTTGAAGTTG
CTCGTATTCTGGGTGAACTTGAACTGGATTGGGAATCTATTGCTGCGGGA
TTACTACATGACACAGTTGAAGATACAAATGTTGTTACTTTTGAAAGAAT
AGAGGAGGAGTTTGGAGCTACTGTACGCCGCATTGTAGAGGGAGAGACTA
AGGTATCAAAGCTGGGAAAGTTAAAGTGTAAGAATGAAAACCATTCAGTG
CAAGATGTTAAAGCTGATGACCTACGGCAAATGTTTCTAGCCATGACTGA
GGAGGTCCGTGTTATCATAGTCAAATTGGCTGATAGATTGCATAACATGC
GCACTCTTTCACACATGCCTCCACATAAGCAGTCCAGCATTGCAACGGAG
ACATTGCAGGTCTTTGCTCCCTTGGCAAAATTGTTAGGGATGTACCAAAT
TAAGTCTGAACTTGAAAATCTATCCTTTATGTACACAAATGCTGAAGATT
ATGCCAAGGTCAAAAGAAGAGTTGCAGACCTCTATAAAGAACATGAAAAA
GAACTTGAGGAGGCGAACAAAATTTTGATGAAGAAGATTGAGGATGATCA
GTTCTTGGACCTTATGACTGTCAAACTGAAATTCGCTCTGTATGTAAGGA
GCCTTAC
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