CX296846
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_MYXXA (GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.371e-49 Identity = 100/226 (44.25%), Postives = 156/226 (69.03%), Query Frame = 3 Query: 21 PTISYLSPN-ELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 695
PT+S P+ +L+++++A + + + H GQ R+SGEP+++HP+EVA ILGEL+LD SI GLLHDT+EDT + T E + E FG+ V +V+G TK+SK + + S ++ +A++ R+M +AM +++RVI+VKLADR HNMRTL HM KQ+ IA ETL ++APLA LG+ IK+ELE+LSF Y +++ ++ ++ KE EK +E+ ++ K+ +
Sbjct: 27 PTVSQYHPDPDLDIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDT-LATEEELTELFGSEVAHLVDGVTKLSKFSA----SASLSQEEKQAENFRKMIIAMAQDIRVILVKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAE 247
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_BACSU (GTP pyrophosphokinase OS=Bacillus subtilis GN=relA PE=3 SV=3) HSP 1 Score: 187.193 bits (474), Expect = 8.315e-47 Identity = 99/222 (44.59%), Postives = 150/222 (67.57%), Query Frame = 3 Query: 30 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIED 695
SYLS + V +A + A +AH Q R+SGEP+IIHP++VA IL +LE+D +IA G LHD VEDT+V T + ++E F V +V+G V+KLGK+K K++ ++ +A++ R+MF+AM +++RVI++KLADRLHNMRTL H+P KQ I+ ETL++FAPLA LG+ +IK ELE+ + Y N + Y ++ + E E ++E + K++E+
Sbjct: 18 SYLSDEHIAFVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDV-TLDDLKEAFSEEVAMLVDG---VTKLGKIKYKSQ----EEQQAENHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEE 231
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STREQ (Putative GTP pyrophosphokinase OS=Streptococcus equisimilis GN=relA PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.045e-44 Identity = 98/228 (42.98%), Postives = 150/228 (65.79%), Query Frame = 3 Query: 33 YLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEE-ANKILMKKIEDDQFLDL 713
Y++ + V++AL A AH Q R+SGEP+I+HP++VA IL +L LD ++A G LHD VEDT++ T + IE +FG VR IV+G V+KLGK++ K+ + A++ R+M +AM++++RVI+VKLADRLHNMRTL H+ KQ I+ ET++++APLA LG+ +IK ELE+L+F Y N ++ K+ + + +E E +++ KI E F D+
Sbjct: 19 YMNETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDI-TLDNIEFDFGKDVRDIVDG---VTKLGKVEYKSHEEQL----AENHRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGLFGDV 238
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_SYNY3 (Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803) GN=spoT PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.605e-44 Identity = 97/214 (45.33%), Postives = 135/214 (63.08%), Query Frame = 3 Query: 57 LVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 698
L+ RA A++ H Q+R+SGEP+I HPV VA +L +L D IAAG LHD VEDT++ + E+IE FG +VEG TK+SK S + +A++ R+MFLAM +++RVI+VKLADRLHNMRTL + P KQ IA ET +FAPLA LG+++ K ELE+LSF Y + Y K++ V + + E LE +L ++ D+
Sbjct: 53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDI-SIEQIEALFGEETASLVEGVTKLSKFNF-------SSTTEHQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPDSYRKIQSLVVEKRGDRESRLETVKDMLRFRLRDE 258
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_SHIFL (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Shigella flexneri GN=spoT PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43 Identity = 94/208 (45.19%), Postives = 144/208 (69.23%), Query Frame = 3 Query: 3 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 623
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++ +A++ R+M +AM +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG++ IK+ELE L F Y +K V
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVV 202
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_ECOLI (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli (strain K12) GN=spoT PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43 Identity = 94/208 (45.19%), Postives = 144/208 (69.23%), Query Frame = 3 Query: 3 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 623
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++ +A++ R+M +AM +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG++ IK+ELE L F Y +K V
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVV 202
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: SPOT_ECO57 (Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43 Identity = 94/208 (45.19%), Postives = 144/208 (69.23%), Query Frame = 3 Query: 3 LWEDLRPTI-SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRV 623
L+E L I +YL ++++ +R+A ++A +AH+GQ R SGEP+I HPV VA IL E++LD+E++ A LLHD +EDT T++ +E+ FG +V +VEG VSKL KLK +++ ++ +A++ R+M +AM +++RVI++KLADR HNMRTL + P K+ IA ETL++++PLA LG++ IK+ELE L F Y +K V
Sbjct: 3 LFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPA-TYQDMEQLFGKSVAELVEG---VSKLDKLKFRDK----KEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVV 202
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAES (GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=relA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43 Identity = 98/223 (43.95%), Postives = 147/223 (65.92%), Query Frame = 3 Query: 30 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 698
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y ++ Y R+ +L K+ E E + KI+++
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE 228
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAEQ (GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=relA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43 Identity = 98/223 (43.95%), Postives = 147/223 (65.92%), Query Frame = 3 Query: 30 SYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEANKILMKKIEDD 698
SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT+ TFE +++ F + RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y ++ Y R+ +L K+ E E + KI+++
Sbjct: 18 SYLSTSEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY-TFEDVKDMFNEEIARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYF----RIVNLMKKKRSEREAYITNAINKIKNE 228
BLAST of CX296846 vs. ExPASy Swiss-Prot
Match: RELA_STAAW (GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.271e-43 Identity = 99/219 (45.21%), Postives = 141/219 (64.38%), Query Frame = 3 Query: 9 EDLRPTISYLSPNELELVRRALMLAFEAHDGQKRRSGEPFIIHPVEVARILGELELDWESIAAGLLHDTVEDTNVVTFERIEEEFGATVRRIVEGETKVSKLGKLKCKNENHSVQDVKADDLRQMFLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQSSIATETLQVFAPLAKLLGMYQIKSELENLSFMYTNAEDYAKVKRRVADLYKEHEKELEEA 665
E L SYLS +E E V ++ +A+EAH GQ R++G P+I+HP++VA IL E+ LD +I AG LHD +EDT TFE ++E F V RIV+G TK+ K+ K + K E +A++ R++F+A+ ++VRVI+VKLADRLHNMRTL MP KQ I+ ETL+++APLA LG+ IK ELE+ + Y + Y ++ + E E +E A
Sbjct: 18 EVLHKAKSYLSADEYEYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY-TFEDVKEMFNEEVARIVDGVTKLKKV-KYRSKEEQ------QAENHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRIVNLMKKKRSEREAYIETA 228 The following BLAST results are available for this feature:
BLAST of CX296846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296846 ID=CX296846; Name=CX296846; organism=Citrus clementina; type=EST; length=757bpback to top |